RNA–Protein interactions for RNA: ENST00000552532.1

AC089998.4-201, humanhuman

TSL 3 BASIC

Gene AC089998.4, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC089998.4-201ENST00000552532 AEBP2Q6ZN18 517 aaPredicted RBP30.26■■■□□ 2.43
AC089998.4-201ENST00000552532 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
AC089998.4-201ENST00000552532 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
AC089998.4-201ENST00000552532 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
AC089998.4-201ENST00000552532 POTEDQ86YR6 584 aa24.49■■□□□ 1.51
AC089998.4-201ENST00000552532 FOXD1Q16676 465 aa24.33■■□□□ 1.49
AC089998.4-201ENST00000552532 MSH5O43196 834 aa23.17■■□□□ 1.3
AC089998.4-201ENST00000552532 PIAS4Q8N2W9 510 aaPredicted RBP22.48■■□□□ 1.19
AC089998.4-201ENST00000552532 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
AC089998.4-201ENST00000552532 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
AC089998.4-201ENST00000552532 ADRA2BP18089 450 aa21.78■■□□□ 1.08
AC089998.4-201ENST00000552532 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
AC089998.4-201ENST00000552532 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
AC089998.4-201ENST00000552532 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
AC089998.4-201ENST00000552532 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
AC089998.4-201ENST00000552532 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
AC089998.4-201ENST00000552532 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
AC089998.4-201ENST00000552532 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
AC089998.4-201ENST00000552532 HOXD11P31277 338 aaPredicted RBP19.35■□□□□ 0.69
AC089998.4-201ENST00000552532 ABCC9O60706 1549 aa19.34■□□□□ 0.69
AC089998.4-201ENST00000552532 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
AC089998.4-201ENST00000552532 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
AC089998.4-201ENST00000552532 PPP4R3CPQ6ZMV5 832 aa19.12■□□□□ 0.65
AC089998.4-201ENST00000552532 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
AC089998.4-201ENST00000552532 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
AC089998.4-201ENST00000552532 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
AC089998.4-201ENST00000552532 POTEHQ6S545 545 aa18.97■□□□□ 0.63
AC089998.4-201ENST00000552532 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
AC089998.4-201ENST00000552532 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
AC089998.4-201ENST00000552532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC089998.4-201ENST00000552532 NACADO15069 1562 aa18.29■□□□□ 0.52
AC089998.4-201ENST00000552532 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
AC089998.4-201ENST00000552532 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
AC089998.4-201ENST00000552532 DSG3P32926 999 aa18.07■□□□□ 0.48
AC089998.4-201ENST00000552532 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
AC089998.4-201ENST00000552532 CAPN15O75808 1086 aa17.91■□□□□ 0.46
AC089998.4-201ENST00000552532 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
AC089998.4-201ENST00000552532 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
AC089998.4-201ENST00000552532 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
AC089998.4-201ENST00000552532 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
AC089998.4-201ENST00000552532 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
AC089998.4-201ENST00000552532 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
AC089998.4-201ENST00000552532 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.44
AC089998.4-201ENST00000552532 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
AC089998.4-201ENST00000552532 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
AC089998.4-201ENST00000552532 APLP2Q06481 763 aa17.52■□□□□ 0.4
AC089998.4-201ENST00000552532 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
AC089998.4-201ENST00000552532 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
AC089998.4-201ENST00000552532 ABCB7O75027 752 aa17.42■□□□□ 0.38
AC089998.4-201ENST00000552532 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
AC089998.4-201ENST00000552532 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
AC089998.4-201ENST00000552532 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
AC089998.4-201ENST00000552532 CHRDL2Q6WN34 429 aa17.33■□□□□ 0.36
AC089998.4-201ENST00000552532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
AC089998.4-201ENST00000552532 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
AC089998.4-201ENST00000552532 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
AC089998.4-201ENST00000552532 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
AC089998.4-201ENST00000552532 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
AC089998.4-201ENST00000552532 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
AC089998.4-201ENST00000552532 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
AC089998.4-201ENST00000552532 KCNA4P22459 653 aa16.86■□□□□ 0.29
AC089998.4-201ENST00000552532 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
AC089998.4-201ENST00000552532 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
AC089998.4-201ENST00000552532 SMARCA2P51531 1590 aa16.78■□□□□ 0.28
AC089998.4-201ENST00000552532 POLA2Q14181 598 aa16.76■□□□□ 0.27
AC089998.4-201ENST00000552532 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
AC089998.4-201ENST00000552532 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
AC089998.4-201ENST00000552532 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
AC089998.4-201ENST00000552532 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
AC089998.4-201ENST00000552532 CUX2O14529 1486 aa16.69■□□□□ 0.26
AC089998.4-201ENST00000552532 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
AC089998.4-201ENST00000552532 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
AC089998.4-201ENST00000552532 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
AC089998.4-201ENST00000552532 HAX1O00165 279 aa16.66■□□□□ 0.26
AC089998.4-201ENST00000552532 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
AC089998.4-201ENST00000552532 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
AC089998.4-201ENST00000552532 NESP48681 1621 aa16.58■□□□□ 0.24
AC089998.4-201ENST00000552532 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
AC089998.4-201ENST00000552532 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
AC089998.4-201ENST00000552532 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
AC089998.4-201ENST00000552532 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
AC089998.4-201ENST00000552532 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
AC089998.4-201ENST00000552532 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
AC089998.4-201ENST00000552532 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC089998.4-201ENST00000552532 EVX2Q03828 476 aa16.39■□□□□ 0.21
AC089998.4-201ENST00000552532 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
AC089998.4-201ENST00000552532 WIZO95785 1651 aa16.32■□□□□ 0.2
AC089998.4-201ENST00000552532 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
AC089998.4-201ENST00000552532 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
AC089998.4-201ENST00000552532 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
AC089998.4-201ENST00000552532 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
AC089998.4-201ENST00000552532 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
AC089998.4-201ENST00000552532 CFTRP13569 1480 aa16.21■□□□□ 0.19
AC089998.4-201ENST00000552532 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
AC089998.4-201ENST00000552532 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
AC089998.4-201ENST00000552532 LHX8Q68G74 356 aa16.18■□□□□ 0.18
AC089998.4-201ENST00000552532 WDR62O43379 1518 aa16.17■□□□□ 0.18
AC089998.4-201ENST00000552532 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
AC089998.4-201ENST00000552532 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
AC089998.4-201ENST00000552532 PLSCR2Q9NRY7 297 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms