Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SCRN2-204ENST00000578840 912 ntTSL 312.53□□□□□ -0.42e-8■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-203ENST00000578323 624 ntTSL 512.31□□□□□ -0.442e-8■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.491e-7■■□□□ 13.4
PRPF8Q6P2Q9 SCRN2-206ENST00000580428 717 ntTSL 211.94□□□□□ -0.52e-8■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.541e-7■■□□□ 13.4
PRPF8Q6P2Q9 DNTTIP2-203ENST00000460191 3084 ntTSL 211.65□□□□□ -0.545e-6■■□□□ 13.4
PRPF8Q6P2Q9 HDAC7-215ENST00000447463 555 ntTSL 411.58□□□□□ -0.567e-11■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.621e-7■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.645e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-208ENST00000465155 1626 ntTSL 210.93□□□□□ -0.665e-6■■□□□ 13.4
PRPF8Q6P2Q9 RAD50-209ENST00000533482 4373 ntTSL 1 (best)10.84□□□□□ -0.675e-6■■□□□ 13.4
PRPF8Q6P2Q9 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.715e-6■■□□□ 13.4
PRPF8Q6P2Q9 AL390719.1-206ENST00000451054 565 ntTSL 210.61□□□□□ -0.715e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC10.36□□□□□ -0.755e-6■■□□□ 13.4
PRPF8Q6P2Q9 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.755e-6■■□□□ 13.4
PRPF8Q6P2Q9 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.785e-6■■□□□ 13.4
PRPF8Q6P2Q9 RTL8C-203ENST00000495563 578 ntTSL 510.02□□□□□ -0.815e-6■■□□□ 13.4
PRPF8Q6P2Q9 AL390719.1-203ENST00000456409 750 ntTSL 29.98□□□□□ -0.815e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC116366.3-201ENST00000638452 7893 ntAPPRIS ALT2 TSL 59.92□□□□□ -0.825e-6■■□□□ 13.4
PRPF8Q6P2Q9 AL390719.1-205ENST00000433695 540 ntTSL 29.87□□□□□ -0.835e-6■■□□□ 13.4
PRPF8Q6P2Q9 CALB1-205ENST00000482702 826 ntTSL 38.95□□□□□ -0.985e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-209ENST00000492118 2103 ntTSL 28.88□□□□□ -0.995e-6■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-208ENST00000611027 1059 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.011e-7■■□□□ 13.4
PRPF8Q6P2Q9 RTL8C-202ENST00000464369 616 ntTSL 58.74□□□□□ -1.015e-6■■□□□ 13.4
PRPF8Q6P2Q9 SRPRA-205ENST00000531104 542 ntTSL 28.51□□□□□ -1.055e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-211ENST00000613954 2031 ntTSL 5 BASIC8.42□□□□□ -1.065e-6■■□□□ 13.4
PRPF8Q6P2Q9 AL390719.1-202ENST00000394517 397 ntTSL 58.29□□□□□ -1.085e-6■■□□□ 13.4
PRPF8Q6P2Q9 POLH-202ENST00000372236 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.092e-8■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-207ENST00000493333 1078 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.091e-7■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-205ENST00000478384 743 ntTSL 37.85□□□□□ -1.151e-7■■□□□ 13.4
PRPF8Q6P2Q9 KCNIP2-210ENST00000460388 428 ntTSL 37.65□□□□□ -1.184e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-210ENST00000613104 581 ntTSL 1 (best) BASIC7.64□□□□□ -1.195e-6■■□□□ 13.4
PRPF8Q6P2Q9 FBXL13-210ENST00000471074 987 ntTSL 57.61□□□□□ -1.195e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-207ENST00000464547 767 ntTSL 1 (best)7.47□□□□□ -1.215e-6■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-206ENST00000486347 1381 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.241e-7■■□□□ 13.4
PRPF8Q6P2Q9 PFKFB2-203ENST00000411990 1876 ntTSL 27.24□□□□□ -1.255e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.13□□□□□ -1.275e-6■■□□□ 13.4
PRPF8Q6P2Q9 TIAL1-212ENST00000495821 372 ntTSL 27.09□□□□□ -1.285e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-205ENST00000366985 516 ntTSL 57.08□□□□□ -1.285e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-206ENST00000366987 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.285e-6■■□□□ 13.4
PRPF8Q6P2Q9 NPC1-204ENST00000586718 574 ntTSL 36.93□□□□□ -1.37e-11■■□□□ 13.4
PRPF8Q6P2Q9 AC109830.1-201ENST00000504728 744 ntTSL 36.82□□□□□ -1.325e-6■■□□□ 13.4
PRPF8Q6P2Q9 CALB1-207ENST00000514406 561 ntTSL 56.53□□□□□ -1.365e-6■■□□□ 13.4
PRPF8Q6P2Q9 CALB1-209ENST00000520613 548 ntTSL 56.53□□□□□ -1.365e-6■■□□□ 13.4
PRPF8Q6P2Q9 FAM122B-204ENST00000465128 733 ntTSL 36.51□□□□□ -1.371e-7■■□□□ 13.4
PRPF8Q6P2Q9 NICN1-205ENST00000461015 411 ntTSL 46.49□□□□□ -1.375e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.375e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC116366.3-203ENST00000639899 8173 ntTSL 56.44□□□□□ -1.385e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-203ENST00000366981 680 ntTSL 1 (best)5.9□□□□□ -1.465e-6■■□□□ 13.4
PRPF8Q6P2Q9 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.9□□□□□ -1.465e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.89□□□□□ -1.475e-6■■□□□ 13.4
PRPF8Q6P2Q9 CALB1-211ENST00000523716 636 ntTSL 25.88□□□□□ -1.475e-6■■□□□ 13.4
PRPF8Q6P2Q9 CALB1-204ENST00000476853 534 ntTSL 25.76□□□□□ -1.495e-6■■□□□ 13.4
PRPF8Q6P2Q9 CALB1-203ENST00000473670 695 ntTSL 35.58□□□□□ -1.525e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC116366.3-202ENST00000638568 7956 ntAPPRIS ALT2 TSL 55.43□□□□□ -1.545e-6■■□□□ 13.4
PRPF8Q6P2Q9 FAM13A-217ENST00000511623 245 ntTSL 35.38□□□□□ -1.555e-6■■□□□ 13.4
PRPF8Q6P2Q9 GNL2-202ENST00000462812 2409 ntTSL 25.38□□□□□ -1.555e-6■■□□□ 13.4
PRPF8Q6P2Q9 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.551e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.15□□□□□ -1.595e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNAP23-209ENST00000563873 368 ntTSL 35.04□□□□□ -1.65e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC116366.3-204ENST00000638504 7262 ntAPPRIS P5 TSL 54.98□□□□□ -1.615e-6■■□□□ 13.4
PRPF8Q6P2Q9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.85□□□□□ -1.635e-6■■□□□ 13.4
PRPF8Q6P2Q9 KIAA1109-207ENST00000438707 5528 ntTSL 54.65□□□□□ -1.665e-6■■□□□ 13.4
PRPF8Q6P2Q9 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC4.62□□□□□ -1.672e-8■■□□□ 13.4
PRPF8Q6P2Q9 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.685e-6■■□□□ 13.4
PRPF8Q6P2Q9 PFKFB2-208ENST00000545806 543 ntTSL 54.52□□□□□ -1.695e-6■■□□□ 13.4
PRPF8Q6P2Q9 RRAGC-203ENST00000493015 745 ntTSL 34.51□□□□□ -1.695e-6■■□□□ 13.4
PRPF8Q6P2Q9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.5□□□□□ -1.695e-6■■□□□ 13.4
PRPF8Q6P2Q9 FAR1-206ENST00000532769 450 ntTSL 24.14□□□□□ -1.755e-6■■□□□ 13.4
PRPF8Q6P2Q9 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.755e-6■■□□□ 13.4
PRPF8Q6P2Q9 GNL2-205ENST00000479255 422 ntTSL 23.66□□□□□ -1.825e-6■■□□□ 13.4
PRPF8Q6P2Q9 FBXL13-211ENST00000477915 743 ntTSL 53.64□□□□□ -1.835e-6■■□□□ 13.4
PRPF8Q6P2Q9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.935e-6■■□□□ 13.4
PRPF8Q6P2Q9 KIAA1109-202ENST00000306802 4650 ntTSL 1 (best)2.69□□□□□ -1.985e-6■■□□□ 13.4
PRPF8Q6P2Q9 RBM17-209ENST00000467214 389 ntTSL 21.3□□□□□ -2.25e-6■■□□□ 13.4
PRPF8Q6P2Q9 RRAGC-204ENST00000496778 568 ntTSL 51.06□□□□□ -2.245e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATP13A3-208ENST00000485194 586 ntTSL 50.63□□□□□ -2.311e-14■■□□□ 13.4
PRPF8Q6P2Q9 FAR1-202ENST00000524933 818 ntTSL 20.28□□□□□ -2.365e-6■■□□□ 13.4
PRPF8Q6P2Q9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.066e-8■■□□□ 13.4
PRPF8Q6P2Q9 RICTOR-205ENST00000509567 638 ntTSL 31.52□□□□□ -2.172e-6■■□□□ 13.4
PRPF8Q6P2Q9 MT1X-204ENST00000568370 1727 nt13.39□□□□□ -0.274e-6■■□□□ 13.4
PRPF8Q6P2Q9 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC10.99□□□□□ -0.654e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC10.99□□□□□ -0.654e-6■■□□□ 13.4
PRPF8Q6P2Q9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.744e-6■■□□□ 13.4
PRPF8Q6P2Q9 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC10.37□□□□□ -0.754e-6■■□□□ 13.4
PRPF8Q6P2Q9 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.084e-6■■□□□ 13.4
PRPF8Q6P2Q9 MT1X-203ENST00000564974 549 ntTSL 1 (best)8.19□□□□□ -1.14e-6■■□□□ 13.4
PRPF8Q6P2Q9 C1orf35-207ENST00000492757 548 ntTSL 317.96■□□□□ 0.479e-7■■□□□ 13.4
PRPF8Q6P2Q9 ACY1-221ENST00000637199 790 ntTSL 214.28□□□□□ -0.123e-7■■□□□ 13.4
PRPF8Q6P2Q9 ACY1-218ENST00000637034 745 ntTSL 313.3□□□□□ -0.283e-7■■□□□ 13.4
PRPF8Q6P2Q9 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)8.43□□□□□ -1.064e-9■■□□□ 13.4
PRPF8Q6P2Q9 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.483e-9■■□□□ 13.4
PRPF8Q6P2Q9 CHCHD7-206ENST00000518169 442 ntTSL 46.54□□□□□ -1.369e-9■■□□□ 13.4
PRPF8Q6P2Q9 ACSF2-225ENST00000570356 380 ntTSL 513.38□□□□□ -0.272e-7■■□□□ 13.4
PRPF8Q6P2Q9 LIN7B-204ENST00000469137 1057 ntTSL 224.63■■□□□ 1.533e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-208ENST00000527127 586 ntTSL 320.73■□□□□ 0.913e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-220ENST00000532361 970 ntTSL 1 (best)19.92■□□□□ 0.783e-6■■□□□ 13.4
PRPF8Q6P2Q9 FGFR4-216ENST00000514472 552 ntTSL 419.51■□□□□ 0.714e-17■■□□□ 13.4
PRPF8Q6P2Q9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.27■□□□□ 0.683e-6■■□□□ 13.4
PRPF8Q6P2Q9 LIN7B-206ENST00000486217 367 ntTSL 219.27■□□□□ 0.683e-6■■□□□ 13.4
Retrieved 100 of 73,762 protein–RNA pairs in 1125.1 ms