RNA–Protein interactions for RNA: ENST00000476853.1

CALB1-204, Transcript of calbindin 1, humanhuman

TSL 2

Gene CALB1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALB1-204ENST00000476853 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
CALB1-204ENST00000476853 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
CALB1-204ENST00000476853 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
CALB1-204ENST00000476853 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
CALB1-204ENST00000476853 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
CALB1-204ENST00000476853 PLPPR3Q6T4P5 718 aa14.1□□□□□ -0.15
CALB1-204ENST00000476853 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
CALB1-204ENST00000476853 DCAF1Q9Y4B6 1507 aa13.8□□□□□ -0.2
CALB1-204ENST00000476853 SENP3Q9H4L4 574 aaPredicted RBP13.68□□□□□ -0.22
CALB1-204ENST00000476853 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
CALB1-204ENST00000476853 MYO15BQ96JP2 1530 aa13.61□□□□□ -0.23
CALB1-204ENST00000476853 KCNA4P22459 653 aa13.36□□□□□ -0.27
CALB1-204ENST00000476853 NACADO15069 1562 aa13.36□□□□□ -0.27
CALB1-204ENST00000476853 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
CALB1-204ENST00000476853 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
CALB1-204ENST00000476853 ADRA2BP18089 450 aa13.25□□□□□ -0.29
CALB1-204ENST00000476853 ABCC9O60706 1549 aa13.16□□□□□ -0.3
CALB1-204ENST00000476853 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
CALB1-204ENST00000476853 SCRIBQ14160 1630 aa13.03□□□□□ -0.32
CALB1-204ENST00000476853 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
CALB1-204ENST00000476853 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
CALB1-204ENST00000476853 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
CALB1-204ENST00000476853 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
CALB1-204ENST00000476853 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
CALB1-204ENST00000476853 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.36
CALB1-204ENST00000476853 UNC13AQ9UPW8 1703 aa12.72□□□□□ -0.37
CALB1-204ENST00000476853 FOXD1Q16676 465 aa12.65□□□□□ -0.38
CALB1-204ENST00000476853 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
CALB1-204ENST00000476853 CECR2Q9BXF3 1484 aa12.64□□□□□ -0.39
CALB1-204ENST00000476853 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
CALB1-204ENST00000476853 BICRAQ9NZM4 1560 aa12.62□□□□□ -0.39
CALB1-204ENST00000476853 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
CALB1-204ENST00000476853 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
CALB1-204ENST00000476853 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
CALB1-204ENST00000476853 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
CALB1-204ENST00000476853 WIZO95785 1651 aa12.51□□□□□ -0.41
CALB1-204ENST00000476853 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
CALB1-204ENST00000476853 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
CALB1-204ENST00000476853 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
CALB1-204ENST00000476853 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
CALB1-204ENST00000476853 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
CALB1-204ENST00000476853 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
CALB1-204ENST00000476853 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
CALB1-204ENST00000476853 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.44
CALB1-204ENST00000476853 ZBTB22O15209 634 aa12.32□□□□□ -0.44
CALB1-204ENST00000476853 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
CALB1-204ENST00000476853 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
CALB1-204ENST00000476853 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
CALB1-204ENST00000476853 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
CALB1-204ENST00000476853 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
CALB1-204ENST00000476853 EEA1Q15075 1411 aa12.2□□□□□ -0.46
CALB1-204ENST00000476853 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
CALB1-204ENST00000476853 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
CALB1-204ENST00000476853 CFTRP13569 1480 aa12.04□□□□□ -0.48
CALB1-204ENST00000476853 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
CALB1-204ENST00000476853 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
CALB1-204ENST00000476853 TOP2BQ02880 1626 aa12□□□□□ -0.49
CALB1-204ENST00000476853 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
CALB1-204ENST00000476853 CC2D2AQ9P2K1 1620 aa11.99□□□□□ -0.49
CALB1-204ENST00000476853 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
CALB1-204ENST00000476853 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
CALB1-204ENST00000476853 LOC105371045A0A1W2PR82 267 aa11.97□□□□□ -0.49
CALB1-204ENST00000476853 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
CALB1-204ENST00000476853 SYNJ1O43426 1573 aa11.95□□□□□ -0.5
CALB1-204ENST00000476853 KIF21BO75037 1637 aa11.92□□□□□ -0.5
CALB1-204ENST00000476853 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
CALB1-204ENST00000476853 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
CALB1-204ENST00000476853 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
CALB1-204ENST00000476853 FAM9AQ8IZU1 332 aaPredicted RBP11.88□□□□□ -0.51
CALB1-204ENST00000476853 SOGA1O94964 1423 aa11.87□□□□□ -0.51
CALB1-204ENST00000476853 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
CALB1-204ENST00000476853 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
CALB1-204ENST00000476853 CUX1P39880 1505 aa11.83□□□□□ -0.52
CALB1-204ENST00000476853 TRIM26Q12899 539 aaPredicted RBP11.83□□□□□ -0.52
CALB1-204ENST00000476853 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
CALB1-204ENST00000476853 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
CALB1-204ENST00000476853 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
CALB1-204ENST00000476853 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
CALB1-204ENST00000476853 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
CALB1-204ENST00000476853 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
CALB1-204ENST00000476853 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
CALB1-204ENST00000476853 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
CALB1-204ENST00000476853 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
CALB1-204ENST00000476853 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
CALB1-204ENST00000476853 FKBP8Q14318 412 aa11.71□□□□□ -0.53
CALB1-204ENST00000476853 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
CALB1-204ENST00000476853 FGD5Q6ZNL6 1462 aa11.69□□□□□ -0.54
CALB1-204ENST00000476853 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
CALB1-204ENST00000476853 CLIP1P30622 1438 aa11.68□□□□□ -0.54
CALB1-204ENST00000476853 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
CALB1-204ENST00000476853 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
CALB1-204ENST00000476853 CUX2O14529 1486 aa11.65□□□□□ -0.54
CALB1-204ENST00000476853 HRCP23327 699 aa11.65□□□□□ -0.54
CALB1-204ENST00000476853 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
CALB1-204ENST00000476853 CUL7Q14999 1698 aa11.62□□□□□ -0.55
CALB1-204ENST00000476853 ZEB1P37275 1124 aaPredicted RBP11.62□□□□□ -0.55
CALB1-204ENST00000476853 POLA1P09884 1462 aaPredicted RBP11.62□□□□□ -0.55
CALB1-204ENST00000476853 IGF1RP08069 1367 aa11.61□□□□□ -0.55
CALB1-204ENST00000476853 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
CALB1-204ENST00000476853 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms