Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 AC124283.5-201ENST00000624661 1809 ntBASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 AC023632.3-201ENST00000521633 145 ntBASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCBQ9Y3I0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 NUDT16P1-203ENST00000513809 620 ntBASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 KRT8P9-201ENST00000558927 1449 ntBASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 AC079598.2-202ENST00000546624 1451 ntBASIC25.79■■□□□ 1.72
RTCBQ9Y3I0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 AC005521.1-201ENST00000393351 872 ntBASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
RTCBQ9Y3I0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 UNC93B2-201ENST00000285383 730 ntBASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 REXO1L10P-201ENST00000615707 1290 ntBASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 C9orf163-202ENST00000624034 2573 ntBASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.77■■□□□ 1.72
RTCBQ9Y3I0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTCBQ9Y3I0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.76■■□□□ 1.71
RTCBQ9Y3I0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.76■■□□□ 1.71
RTCBQ9Y3I0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.76■■□□□ 1.71
RTCBQ9Y3I0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.76■■□□□ 1.71
RTCBQ9Y3I0 AP000525.1-201ENST00000608286 694 ntBASIC25.76■■□□□ 1.71
RTCBQ9Y3I0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTCBQ9Y3I0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTCBQ9Y3I0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
RTCBQ9Y3I0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.75■■□□□ 1.71
RTCBQ9Y3I0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.75■■□□□ 1.71
RTCBQ9Y3I0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.75■■□□□ 1.71
RTCBQ9Y3I0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.75■■□□□ 1.71
RTCBQ9Y3I0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.75■■□□□ 1.71
RTCBQ9Y3I0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
RTCBQ9Y3I0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 MIR1238-201ENST00000408483 83 ntBASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms