Protein–RNA interactions for Protein: Q9UQ52

CNTN6, Contactin-6, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN6Q9UQ52 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 KRT17P1-201ENST00000399211 1546 ntBASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 NCF1B-203ENST00000435988 1254 ntBASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 AC105036.2-201ENST00000569468 176 ntBASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTN6Q9UQ52 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CNTN6Q9UQ52 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 GUSBP6-202ENST00000438529 1198 ntBASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 AC083906.2-201ENST00000511578 360 ntBASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 AL121832.2-201ENST00000610979 668 ntBASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 AL589743.5-201ENST00000616611 1050 ntBASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTN6Q9UQ52 PTBP1P-201ENST00000554374 1601 ntBASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTN6Q9UQ52 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 MKRN4P-201ENST00000444706 1521 ntBASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.58■■□□□ 1.04
CNTN6Q9UQ52 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 AC006970.2-201ENST00000450065 779 ntBASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 AC073130.3-201ENST00000624389 2278 ntBASIC21.57■■□□□ 1.04
CNTN6Q9UQ52 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 DPP3P2-201ENST00000416030 1696 ntBASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 SMG8-203ENST00000578922 2178 ntBASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTN6Q9UQ52 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms