Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRDM4Q9UKN5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 AC103834.1-201ENST00000520383 144 ntBASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRDM4Q9UKN5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 AC137630.3-201ENST00000607245 391 ntBASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 AC026471.6-201ENST00000622954 1905 ntBASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM4Q9UKN5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.92■□□□□ 0.94
PRDM4Q9UKN5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 AF131216.4-201ENST00000638924 1588 ntBASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.91■□□□□ 0.94
PRDM4Q9UKN5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 TCF3P1-201ENST00000423021 1937 ntBASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM4Q9UKN5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms