Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL35Q9NZE8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.4□□□□□ -0.1
MRPL35Q9NZE8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 MIR6724-1-201ENST00000616420 92 ntBASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 MIR6724-2-201ENST00000616483 92 ntBASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 MIR6724-4-201ENST00000617390 92 ntBASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 MIR6724-3-201ENST00000622482 92 ntBASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.39□□□□□ -0.11
MRPL35Q9NZE8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 AL451085.2-201ENST00000605085 799 ntBASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL35Q9NZE8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms