Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 AF201337.1-201ENST00000520239 748 ntBASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 AC105036.2-201ENST00000569468 176 ntBASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.66■■□□□ 1.22
BLOC1S4Q9NUP1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 SMG8-203ENST00000578922 2178 ntBASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.65■■□□□ 1.22
BLOC1S4Q9NUP1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
BLOC1S4Q9NUP1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
BLOC1S4Q9NUP1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
BLOC1S4Q9NUP1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 GUSBP6-202ENST00000438529 1198 ntBASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
BLOC1S4Q9NUP1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 NCF1B-203ENST00000435988 1254 ntBASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 AC006970.2-201ENST00000450065 779 ntBASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 AC083906.2-201ENST00000511578 360 ntBASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.63■■□□□ 1.21
BLOC1S4Q9NUP1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 DPP3P2-201ENST00000416030 1696 ntBASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 AL121832.2-201ENST00000610979 668 ntBASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 MKRN4P-201ENST00000444706 1521 ntBASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.62■■□□□ 1.21
BLOC1S4Q9NUP1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms