Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
HMG20AQ9NP66 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.39■□□□□ 0.54
HMG20AQ9NP66 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMG20AQ9NP66 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 TCF3P1-201ENST00000423021 1937 ntBASIC18.39■□□□□ 0.53
HMG20AQ9NP66 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20AQ9NP66 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 AL158211.5-201ENST00000623583 2518 ntBASIC18.38■□□□□ 0.53
HMG20AQ9NP66 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.38■□□□□ 0.53
HMG20AQ9NP66 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 AC120498.9-201ENST00000339021 3867 ntBASIC18.38■□□□□ 0.53
HMG20AQ9NP66 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 AC093503.3-201ENST00000624917 2352 ntBASIC18.38■□□□□ 0.53
HMG20AQ9NP66 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20AQ9NP66 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 AC020763.4-201ENST00000623414 4170 ntBASIC18.37■□□□□ 0.53
HMG20AQ9NP66 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 AC005332.7-201ENST00000614046 2005 ntBASIC18.37■□□□□ 0.53
HMG20AQ9NP66 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.37■□□□□ 0.53
HMG20AQ9NP66 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms