Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AL157384.1-201ENST00000445995 2473 ntBASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 AC010980.2-201ENST00000587099 1412 ntBASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCGF1Q9BSM1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 AC007322.3-201ENST00000426526 701 ntBASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCGF1Q9BSM1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCGF1Q9BSM1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.96■□□□□ 0.3
PCGF1Q9BSM1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCGF1Q9BSM1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCGF1Q9BSM1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCGF1Q9BSM1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 CD99P1-205ENST00000527459 561 ntBASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 FAM21FP-204ENST00000608637 956 ntBASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF1Q9BSM1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 LINC01521-201ENST00000504184 1943 ntBASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 LSM12P1-201ENST00000411836 588 ntBASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF1Q9BSM1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms