Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCC1Q96S66 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCC1Q96S66 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCC1Q96S66 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCC1Q96S66 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCC1Q96S66 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCC1Q96S66 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCC1Q96S66 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCC1Q96S66 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCC1Q96S66 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCC1Q96S66 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCC1Q96S66 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCC1Q96S66 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCC1Q96S66 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLCC1Q96S66 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLCC1Q96S66 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
CLCC1Q96S66 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCC1Q96S66 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 MIR6084-201ENST00000622012 110 ntBASIC17.01■□□□□ 0.31
CLCC1Q96S66 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 LETM1P2-201ENST00000597330 2178 ntBASIC17.01■□□□□ 0.31
CLCC1Q96S66 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCC1Q96S66 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 AP006587.3-201ENST00000525742 1516 ntBASIC17.01■□□□□ 0.31
CLCC1Q96S66 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCC1Q96S66 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17■□□□□ 0.31
CLCC1Q96S66 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
CLCC1Q96S66 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 NME4-202ENST00000382940 766 ntTSL 3 BASIC17■□□□□ 0.31
CLCC1Q96S66 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17■□□□□ 0.31
CLCC1Q96S66 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLCC1Q96S66 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17■□□□□ 0.31
CLCC1Q96S66 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLCC1Q96S66 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17■□□□□ 0.31
CLCC1Q96S66 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLCC1Q96S66 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17■□□□□ 0.31
CLCC1Q96S66 BX005040.4-201ENST00000637145 1518 ntBASIC17■□□□□ 0.31
CLCC1Q96S66 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17■□□□□ 0.31
CLCC1Q96S66 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCC1Q96S66 AC003102.1-202ENST00000563394 1796 ntBASIC17■□□□□ 0.31
CLCC1Q96S66 AL049796.1-201ENST00000565336 1766 ntBASIC17■□□□□ 0.31
CLCC1Q96S66 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCC1Q96S66 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCC1Q96S66 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCC1Q96S66 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCC1Q96S66 IRS3P-201ENST00000223076 1006 ntBASIC16.99■□□□□ 0.31
CLCC1Q96S66 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCC1Q96S66 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLCC1Q96S66 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCC1Q96S66 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CLCC1Q96S66 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CLCC1Q96S66 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCC1Q96S66 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCC1Q96S66 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCC1Q96S66 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLCC1Q96S66 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLCC1Q96S66 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
CLCC1Q96S66 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCC1Q96S66 PCDHAC2-203ENST00000615316 3011 ntBASIC16.98■□□□□ 0.31
CLCC1Q96S66 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCC1Q96S66 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCC1Q96S66 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCC1Q96S66 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.98■□□□□ 0.31
CLCC1Q96S66 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms