Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD1Q96PZ7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 AC023511.2-201ENST00000618803 211 ntBASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 EP400NL-214ENST00000641289 2402 ntBASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSMD1Q96PZ7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CSMD1Q96PZ7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 AC010203.1-204ENST00000548782 407 ntBASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD1Q96PZ7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 AC087742.1-201ENST00000575880 1738 ntBASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD1Q96PZ7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 HTR7P1-201ENST00000538670 1336 ntBASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 AC079089.2-201ENST00000531211 1277 ntBASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 MIR1238-201ENST00000408483 83 ntBASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 AL353807.1-201ENST00000427475 662 ntBASIC17.37■□□□□ 0.37
CSMD1Q96PZ7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms