Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTHRC1Q96CG8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 AL512408.1-201ENST00000569378 2000 ntBASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 MIPEPP3-201ENST00000412105 444 ntBASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTHRC1Q96CG8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 BX276092.2-201ENST00000417668 665 ntBASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTHRC1Q96CG8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 LSM12P1-201ENST00000411836 588 ntBASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
CTHRC1Q96CG8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 HLA-L-209ENST00000420110 1011 ntBASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 AC092118.2-201ENST00000613495 667 ntBASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTHRC1Q96CG8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 SLC29A4P1-201ENST00000398760 971 ntBASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 C2orf69P4-201ENST00000565394 541 ntBASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 DPP3P2-201ENST00000416030 1696 ntBASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 PTBP1P-201ENST00000554374 1601 ntBASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
CTHRC1Q96CG8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms