Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.71■□□□□ 0.59
CNOT9Q92600 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CNOT9Q92600 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CNOT9Q92600 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT9Q92600 DUX4L16-201ENST00000555130 1264 ntBASIC18.71■□□□□ 0.59
CNOT9Q92600 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.71■□□□□ 0.59
CNOT9Q92600 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.71■□□□□ 0.59
CNOT9Q92600 AC016405.3-201ENST00000607710 860 ntBASIC18.71■□□□□ 0.59
CNOT9Q92600 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT9Q92600 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CNOT9Q92600 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT9Q92600 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT9Q92600 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CNOT9Q92600 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 AL391422.3-201ENST00000603791 2761 ntBASIC18.7■□□□□ 0.58
CNOT9Q92600 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
CNOT9Q92600 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CNOT9Q92600 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CNOT9Q92600 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 AC007322.4-201ENST00000509611 723 ntBASIC18.7■□□□□ 0.58
CNOT9Q92600 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.7■□□□□ 0.58
CNOT9Q92600 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CNOT9Q92600 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT9Q92600 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 AL162377.1-201ENST00000618844 1793 ntBASIC18.7■□□□□ 0.58
CNOT9Q92600 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT9Q92600 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT9Q92600 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT9Q92600 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT9Q92600 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CNOT9Q92600 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CNOT9Q92600 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CNOT9Q92600 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CNOT9Q92600 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.69■□□□□ 0.58
CNOT9Q92600 CNN2P6-201ENST00000439038 900 ntBASIC18.69■□□□□ 0.58
CNOT9Q92600 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.69■□□□□ 0.58
CNOT9Q92600 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT9Q92600 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 AC022517.1-201ENST00000592429 346 ntBASIC18.69■□□□□ 0.58
CNOT9Q92600 FAM21FP-204ENST00000608637 956 ntBASIC18.69■□□□□ 0.58
CNOT9Q92600 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.69■□□□□ 0.58
CNOT9Q92600 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.69■□□□□ 0.58
CNOT9Q92600 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNOT9Q92600 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CNOT9Q92600 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
CNOT9Q92600 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT9Q92600 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.68■□□□□ 0.58
CNOT9Q92600 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 KRT8P36-201ENST00000489121 1440 ntBASIC18.68■□□□□ 0.58
CNOT9Q92600 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CNOT9Q92600 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT9Q92600 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.68■□□□□ 0.58
CNOT9Q92600 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.68■□□□□ 0.58
CNOT9Q92600 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.68■□□□□ 0.58
CNOT9Q92600 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNOT9Q92600 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms