Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 AL033527.3-201ENST00000566366 1196 ntBASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 AC012354.3-201ENST00000623734 483 ntBASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM4Q8WVI0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.34■□□□□ 0.37
SMIM4Q8WVI0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 AL691432.2-201ENST00000607222 2038 ntBASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 SYT6-210ENST00000641643 1587 ntBASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMIM4Q8WVI0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 AC009237.3-201ENST00000393279 1427 ntBASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.33■□□□□ 0.36
SMIM4Q8WVI0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms