Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 AC009237.3-201ENST00000393279 1427 ntBASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 AL136162.1-201ENST00000607711 1078 ntBASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD2Q8NHY2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.02■□□□□ 0.8
RFWD2Q8NHY2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFWD2Q8NHY2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 AC133561.4-201ENST00000566112 224 ntBASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 AC011298.3-201ENST00000615796 283 ntBASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD2Q8NHY2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 AC005332.7-201ENST00000614046 2005 ntBASIC20■□□□□ 0.79
RFWD2Q8NHY2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 AC024257.2-201ENST00000549699 147 ntBASIC20■□□□□ 0.79
RFWD2Q8NHY2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD2Q8NHY2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20■□□□□ 0.79
RFWD2Q8NHY2 AC061975.6-201ENST00000579045 1553 ntBASIC20■□□□□ 0.79
RFWD2Q8NHY2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD2Q8NHY2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.99■□□□□ 0.79
RFWD2Q8NHY2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD2Q8NHY2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms