Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 AC105206.1-202ENST00000314927 2368 ntBASIC12.86□□□□□ -0.35
SVIPQ8NHG7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.85□□□□□ -0.35
SVIPQ8NHG7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SVIPQ8NHG7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 PKD1P1-201ENST00000458669 6805 ntBASIC12.84□□□□□ -0.35
SVIPQ8NHG7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SVIPQ8NHG7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SVIPQ8NHG7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SVIPQ8NHG7 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SVIPQ8NHG7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms