Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 MIR4508-201ENST00000584178 70 ntBASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CROCCP3Q8IVE0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CROCCP3Q8IVE0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CROCCP3Q8IVE0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 AC087239.1-201ENST00000622671 572 ntBASIC18.35■□□□□ 0.53
CROCCP3Q8IVE0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms