Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 PGM5P4-201ENST00000421970 445 ntBASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 AL353807.1-201ENST00000427475 662 ntBASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 AC005363.2-201ENST00000618631 242 ntBASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00336Q6ZUF6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 AP003071.4-201ENST00000562276 1284 ntBASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 AC005829.2-201ENST00000571422 1056 ntBASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00336Q6ZUF6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00336Q6ZUF6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms