Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN4Q6PJG9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN4Q6PJG9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN4Q6PJG9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 MFSD11-216ENST00000590393 1141 ntBASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.22■□□□□ 0.51
LRFN4Q6PJG9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 AC007225.1-201ENST00000566331 1836 ntBASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN4Q6PJG9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 AC011767.1-201ENST00000617410 1153 ntBASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN4Q6PJG9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 AC027702.1-201ENST00000563810 1770 ntBASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms