Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPL54Q6P161 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.34■□□□□ 0.05
MRPL54Q6P161 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRPL54Q6P161 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.33■□□□□ 0.05
MRPL54Q6P161 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRPL54Q6P161 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MRPL54Q6P161 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MRPL54Q6P161 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
MRPL54Q6P161 AC005332.7-201ENST00000614046 2005 ntBASIC15.33■□□□□ 0.04
MRPL54Q6P161 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 KRT18P60-201ENST00000312876 1297 ntBASIC15.33■□□□□ 0.04
MRPL54Q6P161 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 AC087239.1-201ENST00000622671 572 ntBASIC15.33■□□□□ 0.04
MRPL54Q6P161 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 AC005082.1-201ENST00000413042 2259 ntBASIC15.33■□□□□ 0.04
MRPL54Q6P161 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPL54Q6P161 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPL54Q6P161 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPL54Q6P161 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPL54Q6P161 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPL54Q6P161 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPL54Q6P161 PVT1_1.1-201ENST00000615125 194 ntBASIC15.32■□□□□ 0.04
MRPL54Q6P161 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MRPL54Q6P161 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 AC093503.3-201ENST00000624917 2352 ntBASIC15.32■□□□□ 0.04
MRPL54Q6P161 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPL54Q6P161 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.31■□□□□ 0.04
MRPL54Q6P161 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms