Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ANKRD55Q3KP44 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ANKRD55Q3KP44 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ANKRD55Q3KP44 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.84■□□□□ 0.29
ANKRD55Q3KP44 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ANKRD55Q3KP44 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ANKRD55Q3KP44 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ANKRD55Q3KP44 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 AL139246.5-201ENST00000606645 996 ntBASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 AL138724.1-201ENST00000606771 1088 ntBASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 AC136469.2-201ENST00000623944 1028 ntBASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ANKRD55Q3KP44 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 AC009237.3-201ENST00000393279 1427 ntBASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ANKRD55Q3KP44 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 AC096631.2-201ENST00000436136 790 ntBASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ANKRD55Q3KP44 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ANKRD55Q3KP44 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms