Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFNB3Q15768 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFNB3Q15768 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.34■□□□□ 0.37
EFNB3Q15768 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
EFNB3Q15768 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EFNB3Q15768 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
EFNB3Q15768 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
EFNB3Q15768 FEM1AP4-201ENST00000443167 1987 ntBASIC17.33■□□□□ 0.37
EFNB3Q15768 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFNB3Q15768 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
EFNB3Q15768 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
EFNB3Q15768 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFNB3Q15768 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFNB3Q15768 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
EFNB3Q15768 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
EFNB3Q15768 KRT8P36-201ENST00000489121 1440 ntBASIC17.33■□□□□ 0.36
EFNB3Q15768 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
EFNB3Q15768 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EFNB3Q15768 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.33■□□□□ 0.36
EFNB3Q15768 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.33■□□□□ 0.36
EFNB3Q15768 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
EFNB3Q15768 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 SOX15-203ENST00000570788 1093 ntBASIC17.33■□□□□ 0.36
EFNB3Q15768 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.33■□□□□ 0.36
EFNB3Q15768 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.33■□□□□ 0.36
EFNB3Q15768 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 AC073648.6-201ENST00000641589 218 ntBASIC17.33■□□□□ 0.36
EFNB3Q15768 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
EFNB3Q15768 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.33■□□□□ 0.36
EFNB3Q15768 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
EFNB3Q15768 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFNB3Q15768 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.32■□□□□ 0.36
EFNB3Q15768 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.32■□□□□ 0.36
EFNB3Q15768 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
EFNB3Q15768 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
EFNB3Q15768 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
EFNB3Q15768 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.32■□□□□ 0.36
EFNB3Q15768 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
EFNB3Q15768 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.32■□□□□ 0.36
EFNB3Q15768 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EFNB3Q15768 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.32■□□□□ 0.36
EFNB3Q15768 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.32■□□□□ 0.36
EFNB3Q15768 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.32■□□□□ 0.36
EFNB3Q15768 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.32■□□□□ 0.36
EFNB3Q15768 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.32■□□□□ 0.36
EFNB3Q15768 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFNB3Q15768 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
EFNB3Q15768 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.31■□□□□ 0.36
EFNB3Q15768 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
EFNB3Q15768 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 KRT17P3-201ENST00000420566 1262 ntBASIC17.31■□□□□ 0.36
EFNB3Q15768 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.31■□□□□ 0.36
EFNB3Q15768 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
EFNB3Q15768 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.31■□□□□ 0.36
EFNB3Q15768 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.31■□□□□ 0.36
EFNB3Q15768 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.31■□□□□ 0.36
EFNB3Q15768 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.31■□□□□ 0.36
EFNB3Q15768 AC005829.2-201ENST00000571422 1056 ntBASIC17.31■□□□□ 0.36
EFNB3Q15768 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.31■□□□□ 0.36
EFNB3Q15768 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.31■□□□□ 0.36
EFNB3Q15768 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.31■□□□□ 0.36
EFNB3Q15768 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EFNB3Q15768 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFNB3Q15768 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
EFNB3Q15768 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms