Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.66■□□□□ 0.9
ATXN3P54252 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATXN3P54252 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.66■□□□□ 0.9
ATXN3P54252 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 Z98882.1-201ENST00000622160 2253 ntBASIC20.66■□□□□ 0.9
ATXN3P54252 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATXN3P54252 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.65■□□□□ 0.9
ATXN3P54252 AC092667.1-201ENST00000434301 2586 ntBASIC20.65■□□□□ 0.9
ATXN3P54252 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.65■□□□□ 0.9
ATXN3P54252 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.65■□□□□ 0.9
ATXN3P54252 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.65■□□□□ 0.9
ATXN3P54252 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.65■□□□□ 0.9
ATXN3P54252 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.65■□□□□ 0.9
ATXN3P54252 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN3P54252 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.65■□□□□ 0.9
ATXN3P54252 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATXN3P54252 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
ATXN3P54252 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATXN3P54252 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATXN3P54252 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ATXN3P54252 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATXN3P54252 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATXN3P54252 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.64■□□□□ 0.89
ATXN3P54252 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.64■□□□□ 0.89
ATXN3P54252 AL359736.2-201ENST00000621992 437 ntBASIC20.64■□□□□ 0.89
ATXN3P54252 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ATXN3P54252 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN3P54252 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.64■□□□□ 0.89
ATXN3P54252 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
ATXN3P54252 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ATXN3P54252 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3P54252 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3P54252 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ATXN3P54252 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.63■□□□□ 0.89
ATXN3P54252 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.63■□□□□ 0.89
ATXN3P54252 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.63■□□□□ 0.89
ATXN3P54252 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.63■□□□□ 0.89
ATXN3P54252 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.63■□□□□ 0.89
ATXN3P54252 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.63■□□□□ 0.89
ATXN3P54252 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3P54252 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3P54252 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3P54252 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.62■□□□□ 0.89
ATXN3P54252 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3P54252 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
ATXN3P54252 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ATXN3P54252 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3P54252 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3P54252 AC060766.5-201ENST00000590539 871 ntBASIC20.62■□□□□ 0.89
ATXN3P54252 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ATXN3P54252 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3P54252 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3P54252 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.62■□□□□ 0.89
ATXN3P54252 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3P54252 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
ATXN3P54252 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ATXN3P54252 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3P54252 FEM1AP4-201ENST00000443167 1987 ntBASIC20.61■□□□□ 0.89
ATXN3P54252 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3P54252 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3P54252 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3P54252 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3P54252 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3P54252 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3P54252 KRT17P3-201ENST00000420566 1262 ntBASIC20.61■□□□□ 0.89
ATXN3P54252 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3P54252 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms