Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GTF2A1P52655 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GTF2A1P52655 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
GTF2A1P52655 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF2A1P52655 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
GTF2A1P52655 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 MIR4449-201ENST00000578365 66 ntBASIC19.89■□□□□ 0.77
GTF2A1P52655 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
GTF2A1P52655 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
GTF2A1P52655 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2A1P52655 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
GTF2A1P52655 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 AL049796.1-201ENST00000565336 1766 ntBASIC19.88■□□□□ 0.77
GTF2A1P52655 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
GTF2A1P52655 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF2A1P52655 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2A1P52655 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
GTF2A1P52655 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF2A1P52655 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.88■□□□□ 0.77
GTF2A1P52655 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF2A1P52655 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
GTF2A1P52655 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
GTF2A1P52655 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
GTF2A1P52655 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF2A1P52655 AC020907.5-201ENST00000624372 1936 ntBASIC19.87■□□□□ 0.77
GTF2A1P52655 DUX4L9-201ENST00000449051 1259 ntBASIC19.87■□□□□ 0.77
GTF2A1P52655 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GTF2A1P52655 MIR6765-201ENST00000614092 87 ntBASIC19.87■□□□□ 0.77
GTF2A1P52655 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.87■□□□□ 0.77
GTF2A1P52655 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2A1P52655 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.87■□□□□ 0.77
GTF2A1P52655 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GTF2A1P52655 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
GTF2A1P52655 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.87■□□□□ 0.77
GTF2A1P52655 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF2A1P52655 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF2A1P52655 AC099778.1-201ENST00000568593 1911 ntBASIC19.86■□□□□ 0.77
GTF2A1P52655 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF2A1P52655 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF2A1P52655 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF2A1P52655 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.86■□□□□ 0.77
GTF2A1P52655 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
GTF2A1P52655 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.86■□□□□ 0.77
GTF2A1P52655 LONRF2P2-201ENST00000439212 571 ntBASIC19.86■□□□□ 0.77
GTF2A1P52655 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
GTF2A1P52655 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms