Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATRXP46100 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATRXP46100 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATRXP46100 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATRXP46100 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATRXP46100 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATRXP46100 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATRXP46100 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.7■□□□□ 0.58
ATRXP46100 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATRXP46100 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATRXP46100 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.69■□□□□ 0.58
ATRXP46100 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATRXP46100 AC008622.2-201ENST00000617006 1229 ntBASIC18.69■□□□□ 0.58
ATRXP46100 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.69■□□□□ 0.58
ATRXP46100 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.69■□□□□ 0.58
ATRXP46100 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATRXP46100 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.69■□□□□ 0.58
ATRXP46100 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATRXP46100 AC128688.1-201ENST00000487626 519 ntBASIC18.69■□□□□ 0.58
ATRXP46100 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.69■□□□□ 0.58
ATRXP46100 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATRXP46100 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.69■□□□□ 0.58
ATRXP46100 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATRXP46100 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATRXP46100 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
ATRXP46100 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 FAM220CP-201ENST00000395253 831 ntBASIC18.68■□□□□ 0.58
ATRXP46100 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.68■□□□□ 0.58
ATRXP46100 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATRXP46100 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.68■□□□□ 0.58
ATRXP46100 AL671883.3-201ENST00000603274 991 ntBASIC18.68■□□□□ 0.58
ATRXP46100 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.68■□□□□ 0.58
ATRXP46100 AC092053.2-201ENST00000640557 1818 ntBASIC18.68■□□□□ 0.58
ATRXP46100 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATRXP46100 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.68■□□□□ 0.58
ATRXP46100 KRT18P13-201ENST00000400056 1290 ntBASIC18.68■□□□□ 0.58
ATRXP46100 AL353807.1-201ENST00000427475 662 ntBASIC18.68■□□□□ 0.58
ATRXP46100 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATRXP46100 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.68■□□□□ 0.58
ATRXP46100 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.68■□□□□ 0.58
ATRXP46100 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.68■□□□□ 0.58
ATRXP46100 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATRXP46100 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATRXP46100 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 RNF152P1-201ENST00000397754 604 ntBASIC18.67■□□□□ 0.58
ATRXP46100 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.67■□□□□ 0.58
ATRXP46100 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 AC116407.4-201ENST00000623319 1061 ntBASIC18.67■□□□□ 0.58
ATRXP46100 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ATRXP46100 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATRXP46100 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATRXP46100 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATRXP46100 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.67■□□□□ 0.58
ATRXP46100 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.66■□□□□ 0.58
ATRXP46100 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 CKBP1-201ENST00000565489 1086 ntBASIC18.66■□□□□ 0.58
ATRXP46100 AC026471.6-201ENST00000622954 1905 ntBASIC18.66■□□□□ 0.58
ATRXP46100 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATRXP46100 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 PCED1CP-201ENST00000419887 785 ntBASIC18.66■□□□□ 0.58
ATRXP46100 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.66■□□□□ 0.58
ATRXP46100 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 AC009078.2-202ENST00000463353 338 ntBASIC18.66■□□□□ 0.58
ATRXP46100 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.66■□□□□ 0.58
ATRXP46100 AC111152.3-201ENST00000569699 673 ntBASIC18.66■□□□□ 0.58
ATRXP46100 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.66■□□□□ 0.58
ATRXP46100 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.66■□□□□ 0.58
ATRXP46100 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATRXP46100 AC139530.1-201ENST00000575312 1977 ntBASIC18.66■□□□□ 0.58
ATRXP46100 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATRXP46100 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.66■□□□□ 0.58
ATRXP46100 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATRXP46100 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATRXP46100 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.65■□□□□ 0.58
ATRXP46100 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.65■□□□□ 0.58
ATRXP46100 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATRXP46100 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.65■□□□□ 0.58
ATRXP46100 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms