Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
CBX5P45973 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CBX5P45973 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.43■□□□□ 0.38
CBX5P45973 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.43■□□□□ 0.38
CBX5P45973 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.43■□□□□ 0.38
CBX5P45973 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.43■□□□□ 0.38
CBX5P45973 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.43■□□□□ 0.38
CBX5P45973 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CBX5P45973 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CBX5P45973 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CBX5P45973 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX5P45973 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX5P45973 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX5P45973 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX5P45973 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CBX5P45973 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX5P45973 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.42■□□□□ 0.38
CBX5P45973 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.42■□□□□ 0.38
CBX5P45973 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX5P45973 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CBX5P45973 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX5P45973 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX5P45973 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX5P45973 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CBX5P45973 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CBX5P45973 BX005040.4-201ENST00000637145 1518 ntBASIC17.42■□□□□ 0.38
CBX5P45973 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 AC055733.4-201ENST00000638462 1354 ntBASIC17.41■□□□□ 0.38
CBX5P45973 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX5P45973 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX5P45973 AC099778.1-201ENST00000568593 1911 ntBASIC17.41■□□□□ 0.38
CBX5P45973 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX5P45973 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CBX5P45973 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CBX5P45973 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CBX5P45973 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.41■□□□□ 0.38
CBX5P45973 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CBX5P45973 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CBX5P45973 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX5P45973 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CBX5P45973 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBX5P45973 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CBX5P45973 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CBX5P45973 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX5P45973 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX5P45973 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX5P45973 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX5P45973 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.4■□□□□ 0.38
CBX5P45973 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX5P45973 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX5P45973 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBX5P45973 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX5P45973 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX5P45973 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBX5P45973 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CBX5P45973 PCDHAC2-203ENST00000615316 3011 ntBASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms