Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RORAP35398 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RORAP35398 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RORAP35398 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RORAP35398 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 AC093827.2-201ENST00000512654 315 ntBASIC19.31■□□□□ 0.68
RORAP35398 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.31■□□□□ 0.68
RORAP35398 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.31■□□□□ 0.68
RORAP35398 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.31■□□□□ 0.68
RORAP35398 AC011484.1-201ENST00000377652 1995 ntBASIC19.31■□□□□ 0.68
RORAP35398 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RORAP35398 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RORAP35398 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RORAP35398 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RORAP35398 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.3■□□□□ 0.68
RORAP35398 AL049796.1-201ENST00000565336 1766 ntBASIC19.3■□□□□ 0.68
RORAP35398 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RORAP35398 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.3■□□□□ 0.68
RORAP35398 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RORAP35398 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.3■□□□□ 0.68
RORAP35398 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.3■□□□□ 0.68
RORAP35398 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.3■□□□□ 0.68
RORAP35398 AL356652.1-201ENST00000615962 565 ntBASIC19.3■□□□□ 0.68
RORAP35398 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.3■□□□□ 0.68
RORAP35398 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RORAP35398 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.29■□□□□ 0.68
RORAP35398 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.29■□□□□ 0.68
RORAP35398 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RORAP35398 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.29■□□□□ 0.68
RORAP35398 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.29■□□□□ 0.68
RORAP35398 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.29■□□□□ 0.68
RORAP35398 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.29■□□□□ 0.68
RORAP35398 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.29■□□□□ 0.68
RORAP35398 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
RORAP35398 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RORAP35398 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
RORAP35398 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 AL121603.2-201ENST00000557373 2117 ntBASIC19.28■□□□□ 0.68
RORAP35398 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RORAP35398 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.28■□□□□ 0.68
RORAP35398 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.28■□□□□ 0.68
RORAP35398 AC142381.4-202ENST00000563973 229 ntBASIC19.28■□□□□ 0.68
RORAP35398 SOX15-203ENST00000570788 1093 ntBASIC19.28■□□□□ 0.68
RORAP35398 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.28■□□□□ 0.68
RORAP35398 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RORAP35398 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RORAP35398 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.27■□□□□ 0.68
RORAP35398 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RORAP35398 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RORAP35398 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RORAP35398 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RORAP35398 AL158047.1-201ENST00000445918 881 ntBASIC19.27■□□□□ 0.68
RORAP35398 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.27■□□□□ 0.68
RORAP35398 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RORAP35398 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms