Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.42■□□□□ 0.38
GABRR1P24046 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.42■□□□□ 0.38
GABRR1P24046 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
GABRR1P24046 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 AC010141.2-201ENST00000452426 721 ntBASIC17.42■□□□□ 0.38
GABRR1P24046 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.42■□□□□ 0.38
GABRR1P24046 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.42■□□□□ 0.38
GABRR1P24046 AP001160.3-201ENST00000601484 763 ntBASIC17.42■□□□□ 0.38
GABRR1P24046 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.42■□□□□ 0.38
GABRR1P24046 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GABRR1P24046 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.42■□□□□ 0.38
GABRR1P24046 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GABRR1P24046 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GABRR1P24046 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.42■□□□□ 0.38
GABRR1P24046 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABRR1P24046 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GABRR1P24046 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GABRR1P24046 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
GABRR1P24046 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 AC004854.2-201ENST00000608450 1441 ntBASIC17.41■□□□□ 0.38
GABRR1P24046 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GABRR1P24046 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRR1P24046 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.41■□□□□ 0.38
GABRR1P24046 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.41■□□□□ 0.38
GABRR1P24046 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.41■□□□□ 0.38
GABRR1P24046 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 AC092720.2-201ENST00000602388 1665 ntBASIC17.41■□□□□ 0.38
GABRR1P24046 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GABRR1P24046 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GABRR1P24046 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GABRR1P24046 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 AL162377.1-201ENST00000618844 1793 ntBASIC17.4■□□□□ 0.38
GABRR1P24046 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRR1P24046 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRR1P24046 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
GABRR1P24046 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRR1P24046 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
GABRR1P24046 AC245052.3-201ENST00000450182 901 ntBASIC17.4■□□□□ 0.38
GABRR1P24046 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRR1P24046 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.4■□□□□ 0.38
GABRR1P24046 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 AC099778.1-201ENST00000568593 1911 ntBASIC17.4■□□□□ 0.38
GABRR1P24046 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.4■□□□□ 0.38
GABRR1P24046 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GABRR1P24046 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GABRR1P24046 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.4■□□□□ 0.38
GABRR1P24046 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GABRR1P24046 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GABRR1P24046 KRT16P2-201ENST00000414673 1423 ntBASIC17.39■□□□□ 0.38
GABRR1P24046 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.39■□□□□ 0.38
GABRR1P24046 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
GABRR1P24046 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.39■□□□□ 0.37
GABRR1P24046 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.39■□□□□ 0.37
GABRR1P24046 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.39■□□□□ 0.37
GABRR1P24046 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.39■□□□□ 0.37
GABRR1P24046 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.39■□□□□ 0.37
GABRR1P24046 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.39■□□□□ 0.37
GABRR1P24046 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.39■□□□□ 0.37
GABRR1P24046 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GABRR1P24046 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms