Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.52■□□□□ 0.88
RETP07949 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.52■□□□□ 0.88
RETP07949 AL590326.2-201ENST00000625139 305 ntBASIC20.52■□□□□ 0.88
RETP07949 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
RETP07949 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.52■□□□□ 0.88
RETP07949 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RETP07949 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
RETP07949 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.52■□□□□ 0.87
RETP07949 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RETP07949 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RETP07949 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RETP07949 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.51■□□□□ 0.87
RETP07949 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.51■□□□□ 0.87
RETP07949 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.51■□□□□ 0.87
RETP07949 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RETP07949 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 PRKY-204ENST00000533551 1019 ntBASIC20.51■□□□□ 0.87
RETP07949 RN7SL850P-201ENST00000579959 291 ntBASIC20.51■□□□□ 0.87
RETP07949 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETP07949 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.5■□□□□ 0.87
RETP07949 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RETP07949 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.5■□□□□ 0.87
RETP07949 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 RARRES2P10-201ENST00000564312 460 ntBASIC20.5■□□□□ 0.87
RETP07949 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.5■□□□□ 0.87
RETP07949 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETP07949 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RETP07949 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.49■□□□□ 0.87
RETP07949 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RETP07949 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.49■□□□□ 0.87
RETP07949 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.49■□□□□ 0.87
RETP07949 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RETP07949 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RETP07949 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.49■□□□□ 0.87
RETP07949 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.49■□□□□ 0.87
RETP07949 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.49■□□□□ 0.87
RETP07949 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETP07949 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RETP07949 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.48■□□□□ 0.87
RETP07949 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.48■□□□□ 0.87
RETP07949 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.48■□□□□ 0.87
RETP07949 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.48■□□□□ 0.87
RETP07949 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.48■□□□□ 0.87
RETP07949 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.48■□□□□ 0.87
RETP07949 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.48■□□□□ 0.87
RETP07949 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.48■□□□□ 0.87
RETP07949 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.48■□□□□ 0.87
RETP07949 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RETP07949 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RETP07949 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RETP07949 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.48■□□□□ 0.87
RETP07949 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RETP07949 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms