Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.54■□□□□ 0.4
HLA-DQB1P01920 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 AL049812.1-201ENST00000432563 2267 ntBASIC17.54■□□□□ 0.4
HLA-DQB1P01920 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DQB1P01920 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 SYT6-210ENST00000641643 1587 ntBASIC17.53■□□□□ 0.4
HLA-DQB1P01920 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DQB1P01920 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.52■□□□□ 0.4
HLA-DQB1P01920 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 DUX4L19-201ENST00000557448 1267 ntBASIC17.52■□□□□ 0.4
HLA-DQB1P01920 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DQB1P01920 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DQB1P01920 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 AC079598.2-202ENST00000546624 1451 ntBASIC17.51■□□□□ 0.39
HLA-DQB1P01920 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 SERBP1P1-201ENST00000396021 1160 ntBASIC17.51■□□□□ 0.39
HLA-DQB1P01920 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 SLC47A1P1-202ENST00000449666 945 ntBASIC17.51■□□□□ 0.39
HLA-DQB1P01920 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.51■□□□□ 0.39
HLA-DQB1P01920 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DQB1P01920 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms