Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.1■□□□□ 0.81
KLHL41O60662 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL41O60662 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
KLHL41O60662 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
KLHL41O60662 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL41O60662 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL41O60662 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL41O60662 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
KLHL41O60662 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
KLHL41O60662 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL41O60662 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL41O60662 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.1■□□□□ 0.81
KLHL41O60662 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.09■□□□□ 0.81
KLHL41O60662 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL41O60662 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL41O60662 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL41O60662 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL41O60662 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.09■□□□□ 0.81
KLHL41O60662 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.09■□□□□ 0.81
KLHL41O60662 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.09■□□□□ 0.81
KLHL41O60662 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.09■□□□□ 0.81
KLHL41O60662 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.09■□□□□ 0.81
KLHL41O60662 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.09■□□□□ 0.81
KLHL41O60662 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.09■□□□□ 0.81
KLHL41O60662 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL41O60662 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL41O60662 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.09■□□□□ 0.81
KLHL41O60662 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL41O60662 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL41O60662 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.08■□□□□ 0.81
KLHL41O60662 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL41O60662 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL41O60662 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL41O60662 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.08■□□□□ 0.81
KLHL41O60662 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.08■□□□□ 0.81
KLHL41O60662 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.08■□□□□ 0.81
KLHL41O60662 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL41O60662 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL41O60662 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL41O60662 AC004854.2-201ENST00000608450 1441 ntBASIC20.08■□□□□ 0.8
KLHL41O60662 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
KLHL41O60662 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL41O60662 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL41O60662 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL41O60662 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
KLHL41O60662 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.07■□□□□ 0.8
KLHL41O60662 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.07■□□□□ 0.8
KLHL41O60662 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 AC087289.5-201ENST00000586076 3175 ntBASIC20.07■□□□□ 0.8
KLHL41O60662 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.07■□□□□ 0.8
KLHL41O60662 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
KLHL41O60662 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.07■□□□□ 0.8
KLHL41O60662 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.07■□□□□ 0.8
KLHL41O60662 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
KLHL41O60662 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KLHL41O60662 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.07■□□□□ 0.8
KLHL41O60662 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL41O60662 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KLHL41O60662 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KLHL41O60662 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KLHL41O60662 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
KLHL41O60662 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.06■□□□□ 0.8
KLHL41O60662 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.06■□□□□ 0.8
KLHL41O60662 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.06■□□□□ 0.8
KLHL41O60662 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.06■□□□□ 0.8
KLHL41O60662 AC073111.5-205ENST00000641717 521 ntBASIC20.06■□□□□ 0.8
KLHL41O60662 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL41O60662 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.06■□□□□ 0.8
KLHL41O60662 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms