Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 AC006058.3-201ENST00000606217 1069 ntBASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBAL3A6NHL2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 RPS2P52-201ENST00000469610 820 ntBASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 FAM21FP-204ENST00000608637 956 ntBASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TUBAL3A6NHL2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 AL020996.1-203ENST00000536896 2307 ntBASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 AC098590.1-201ENST00000468126 897 ntBASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TUBAL3A6NHL2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 AC091799.1-201ENST00000422823 811 ntBASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 GCSHP5-201ENST00000443090 522 ntBASIC18.16■□□□□ 0.5
TUBAL3A6NHL2 AL158047.1-201ENST00000445918 881 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms