Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.312e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARHGAP27-211ENST00000531735 4754 ntTSL 512.68□□□□□ -0.382e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.37□□□□□ -0.432e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.432e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.792e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC9.94□□□□□ -0.822e-6■■□□□ 13.5
PRPF8Q6P2Q9 SREBF2-203ENST00000435061 770 ntTSL 314.88□□□□□ -0.034e-11■■□□□ 13.5
PRPF8Q6P2Q9 ERBB3-206ENST00000548709 551 ntTSL 26.5□□□□□ -1.377e-8■■□□□ 13.5
PRPF8Q6P2Q9 PRKAR1A-210ENST00000585981 995 ntTSL 56.79□□□□□ -1.326e-7■■□□□ 13.5
PRPF8Q6P2Q9 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC10.78□□□□□ -0.681e-6■■□□□ 13.5
PRPF8Q6P2Q9 NUP62CL-204ENST00000484614 1515 ntTSL 210.27□□□□□ -0.771e-6■■□□□ 13.5
PRPF8Q6P2Q9 SEC14L1-218ENST00000588488 705 ntTSL 512.16□□□□□ -0.461e-8■■□□□ 13.5
PRPF8Q6P2Q9 MLLT6-207ENST00000618652 624 ntTSL 312.97□□□□□ -0.331e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.711e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZC3H4-202ENST00000594019 3259 ntTSL 29.38□□□□□ -0.911e-6■■□□□ 13.5
PRPF8Q6P2Q9 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.11□□□□□ -0.635e-9■■□□□ 13.5
PRPF8Q6P2Q9 PHC2-212ENST00000493483 760 ntTSL 319.87■□□□□ 0.772e-6■■□□□ 13.5
PRPF8Q6P2Q9 PHC2-211ENST00000486897 547 ntTSL 58.26□□□□□ -1.092e-6■■□□□ 13.5
PRPF8Q6P2Q9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.279e-20■■□□□ 13.5
PRPF8Q6P2Q9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.399e-20■■□□□ 13.5
PRPF8Q6P2Q9 CYTH2-202ENST00000391881 1546 ntTSL 517.82■□□□□ 0.444e-8■■□□□ 13.5
PRPF8Q6P2Q9 CYTH2-210ENST00000493260 4652 ntTSL 510.29□□□□□ -0.764e-8■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-202ENST00000563762 1174 ntTSL 213.17□□□□□ -0.31e-7■■□□□ 13.5
PRPF8Q6P2Q9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.41e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.31□□□□□ -0.61e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-208ENST00000567027 1353 ntTSL 211.25□□□□□ -0.611e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-207ENST00000566672 1397 ntTSL 210.9□□□□□ -0.661e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-211ENST00000567411 1743 ntTSL 510.28□□□□□ -0.761e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.771e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.791e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-215ENST00000569410 1351 ntTSL 58.4□□□□□ -1.061e-7■■□□□ 13.5
PRPF8Q6P2Q9 HEXA-213ENST00000568777 6909 ntTSL 56.21□□□□□ -1.421e-7■■□□□ 13.5
PRPF8Q6P2Q9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20■□□□□ 0.794e-11■■□□□ 13.5
PRPF8Q6P2Q9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.92■□□□□ 0.464e-11■■□□□ 13.5
PRPF8Q6P2Q9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.344e-11■■□□□ 13.5
PRPF8Q6P2Q9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.09■□□□□ 0.174e-11■■□□□ 13.5
PRPF8Q6P2Q9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.66□□□□□ -0.064e-11■■□□□ 13.5
PRPF8Q6P2Q9 PYCR1-211ENST00000582198 868 ntTSL 511.86□□□□□ -0.514e-11■■□□□ 13.5
PRPF8Q6P2Q9 SLC12A7-202ENST00000504576 680 ntTSL 511.65□□□□□ -0.543e-7■■□□□ 13.5
PRPF8Q6P2Q9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.55e-7■■□□□ 13.5
PRPF8Q6P2Q9 AKAP1-212ENST00000573326 1580 ntTSL 59.63□□□□□ -0.875e-7■■□□□ 13.5
PRPF8Q6P2Q9 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.945e-7■■□□□ 13.5
PRPF8Q6P2Q9 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.985e-7■■□□□ 13.5
PRPF8Q6P2Q9 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.035e-7■■□□□ 13.5
PRPF8Q6P2Q9 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.085e-7■■□□□ 13.5
PRPF8Q6P2Q9 AKAP1-203ENST00000481416 4089 ntTSL 58.16□□□□□ -1.15e-7■■□□□ 13.5
PRPF8Q6P2Q9 SMAD3-214ENST00000560402 590 ntTSL 411.82□□□□□ -0.523e-14■■□□□ 13.5
PRPF8Q6P2Q9 SMAD3-207ENST00000558763 1957 ntTSL 210.33□□□□□ -0.763e-14■■□□□ 13.5
PRPF8Q6P2Q9 SMAD3-215ENST00000560424 775 ntTSL 38.37□□□□□ -1.073e-14■■□□□ 13.5
PRPF8Q6P2Q9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.068e-10■■□□□ 13.5
PRPF8Q6P2Q9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.54□□□□□ -0.088e-10■■□□□ 13.5
PRPF8Q6P2Q9 MRPL20-204ENST00000487659 1693 ntTSL 212.86□□□□□ -0.358e-10■■□□□ 13.5
PRPF8Q6P2Q9 KLC1-218ENST00000555467 559 ntTSL 220.93■□□□□ 0.944e-6■■□□□ 13.5
PRPF8Q6P2Q9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.924e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARFIP2-207ENST00000529847 920 ntTSL 218.62■□□□□ 0.573e-6■■□□□ 13.5
PRPF8Q6P2Q9 GGH-208ENST00000523788 492 ntTSL 218.08■□□□□ 0.484e-6■■□□□ 13.5
PRPF8Q6P2Q9 YIPF2-208ENST00000589971 879 ntTSL 217.4■□□□□ 0.384e-6■■□□□ 13.5
PRPF8Q6P2Q9 DMPK-212ENST00000597660 803 ntTSL 316.43■□□□□ 0.224e-6■■□□□ 13.5
PRPF8Q6P2Q9 COMMD4-204ENST00000561662 482 ntTSL 316.39■□□□□ 0.214e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARFIP2-208ENST00000530410 971 ntTSL 216.3■□□□□ 0.23e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.154e-6■■□□□ 13.5
PRPF8Q6P2Q9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.094e-6■■□□□ 13.5
PRPF8Q6P2Q9 YIPF2-212ENST00000592646 950 ntTSL 315.41■□□□□ 0.064e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-203ENST00000586479 622 ntTSL 314.79□□□□□ -0.044e-6■■□□□ 13.5
PRPF8Q6P2Q9 CPT1B-211ENST00000476790 563 ntTSL 314.77□□□□□ -0.044e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-207ENST00000588464 545 ntTSL 214.72□□□□□ -0.054e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.174e-6■■□□□ 13.5
PRPF8Q6P2Q9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.24e-6■■□□□ 13.5
PRPF8Q6P2Q9 GGH-204ENST00000518966 574 ntTSL 213.6□□□□□ -0.234e-6■■□□□ 13.5
PRPF8Q6P2Q9 HDAC6-218ENST00000470942 668 ntTSL 313.38□□□□□ -0.274e-6■■□□□ 13.5
PRPF8Q6P2Q9 RNF10-204ENST00000535395 414 ntTSL 212.62□□□□□ -0.394e-6■■□□□ 13.5
PRPF8Q6P2Q9 FLOT2-209ENST00000584569 266 ntTSL 312.2□□□□□ -0.468e-7■■□□□ 13.5
PRPF8Q6P2Q9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.484e-6■■□□□ 13.5
PRPF8Q6P2Q9 SLC9A3R2-206ENST00000565086 685 ntTSL 311.71□□□□□ -0.544e-6■■□□□ 13.5
PRPF8Q6P2Q9 CHIC2-203ENST00000510894 528 ntTSL 211.66□□□□□ -0.544e-6■■□□□ 13.5
PRPF8Q6P2Q9 SNX15-201ENST00000352068 771 ntTSL 5 BASIC11.56□□□□□ -0.564e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-219ENST00000591691 658 ntTSL 211.29□□□□□ -0.64e-6■■□□□ 13.5
PRPF8Q6P2Q9 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC11.25□□□□□ -0.614e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.624e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.634e-6■■□□□ 13.5
PRPF8Q6P2Q9 CALCOCO1-214ENST00000549613 884 ntTSL 210.92□□□□□ -0.665e-6■■□□□ 13.5
PRPF8Q6P2Q9 UBE3B-210ENST00000539599 2763 ntTSL 1 (best)10.91□□□□□ -0.664e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-206ENST00000587868 663 ntTSL 510.83□□□□□ -0.684e-6■■□□□ 13.5
PRPF8Q6P2Q9 ABCC10-208ENST00000469856 285 ntTSL 310.61□□□□□ -0.714e-6■■□□□ 13.5
PRPF8Q6P2Q9 DCTN4-210ENST00000521093 473 ntTSL 410.6□□□□□ -0.712e-11■■□□□ 13.5
PRPF8Q6P2Q9 UBE3B-204ENST00000449510 3771 ntTSL 510.5□□□□□ -0.734e-6■■□□□ 13.5
PRPF8Q6P2Q9 HDAC6-229ENST00000486665 598 ntTSL 210.48□□□□□ -0.734e-6■■□□□ 13.5
PRPF8Q6P2Q9 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.794e-6■■□□□ 13.5
PRPF8Q6P2Q9 SNX15-205ENST00000526702 4713 ntTSL 29.77□□□□□ -0.854e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-218ENST00000591260 580 ntTSL 39.58□□□□□ -0.884e-6■■□□□ 13.5
PRPF8Q6P2Q9 UBE3B-209ENST00000539584 2006 ntTSL 59.56□□□□□ -0.884e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZNF563-203ENST00000595977 958 ntTSL 5 BASIC9.55□□□□□ -0.884e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-212ENST00000589022 732 ntTSL 29.42□□□□□ -0.94e-6■■□□□ 13.5
PRPF8Q6P2Q9 TXNRD1-207ENST00000525265 572 ntTSL 28.47□□□□□ -1.054e-6■■□□□ 13.5
PRPF8Q6P2Q9 IL17RE-209ENST00000480244 416 ntTSL 38.04□□□□□ -1.124e-6■■□□□ 13.5
PRPF8Q6P2Q9 CCDC159-220ENST00000592723 458 ntTSL 47.91□□□□□ -1.144e-6■■□□□ 13.5
PRPF8Q6P2Q9 KLC1-223ENST00000557172 540 ntTSL 47.81□□□□□ -1.164e-6■■□□□ 13.5
PRPF8Q6P2Q9 DCTN4-212ENST00000521533 578 ntTSL 47.75□□□□□ -1.172e-11■■□□□ 13.5
PRPF8Q6P2Q9 PDXDC2P-203ENST00000529118 547 ntTSL 27.4□□□□□ -1.234e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.284e-6■■□□□ 13.5
Retrieved 100 of 73,762 protein–RNA pairs in 1132.5 ms