RNA–Protein interactions for RNA: ENST00000526702.1

SNX15-205, Transcript of sorting nexin 15, humanhuman

TSL 2

Gene SNX15, Length 4,713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-205ENST00000526702 NISCHQ9Y2I1 1504 aa22.68■■□□□ 1.22
SNX15-205ENST00000526702 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
SNX15-205ENST00000526702 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
SNX15-205ENST00000526702 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
SNX15-205ENST00000526702 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
SNX15-205ENST00000526702 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
SNX15-205ENST00000526702 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
SNX15-205ENST00000526702 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
SNX15-205ENST00000526702 APLP2Q06481 763 aa19.2■□□□□ 0.66
SNX15-205ENST00000526702 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.65
SNX15-205ENST00000526702 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
SNX15-205ENST00000526702 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
SNX15-205ENST00000526702 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
SNX15-205ENST00000526702 ABCC9O60706 1549 aa18.88■□□□□ 0.61
SNX15-205ENST00000526702 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
SNX15-205ENST00000526702 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
SNX15-205ENST00000526702 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
SNX15-205ENST00000526702 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
SNX15-205ENST00000526702 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
SNX15-205ENST00000526702 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.58
SNX15-205ENST00000526702 HRCP23327 699 aa18.59■□□□□ 0.57
SNX15-205ENST00000526702 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNX15-205ENST00000526702 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
SNX15-205ENST00000526702 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
SNX15-205ENST00000526702 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
SNX15-205ENST00000526702 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
SNX15-205ENST00000526702 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
SNX15-205ENST00000526702 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
SNX15-205ENST00000526702 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
SNX15-205ENST00000526702 NACADO15069 1562 aa18.11■□□□□ 0.49
SNX15-205ENST00000526702 RB1CC1Q8TDY2 1594 aa18.09■□□□□ 0.49
SNX15-205ENST00000526702 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
SNX15-205ENST00000526702 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
SNX15-205ENST00000526702 ITGAEP38570 1179 aa18.03■□□□□ 0.48
SNX15-205ENST00000526702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.48
SNX15-205ENST00000526702 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
SNX15-205ENST00000526702 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
SNX15-205ENST00000526702 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
SNX15-205ENST00000526702 NEFLP07196 543 aa17.79■□□□□ 0.44
SNX15-205ENST00000526702 MYT1Q01538 1121 aa17.79■□□□□ 0.44
SNX15-205ENST00000526702 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.43
SNX15-205ENST00000526702 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
SNX15-205ENST00000526702 EEA1Q15075 1411 aa17.7■□□□□ 0.42
SNX15-205ENST00000526702 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
SNX15-205ENST00000526702 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.41
SNX15-205ENST00000526702 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
SNX15-205ENST00000526702 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
SNX15-205ENST00000526702 P3H3Q8IVL6 736 aa17.55■□□□□ 0.4
SNX15-205ENST00000526702 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
SNX15-205ENST00000526702 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
SNX15-205ENST00000526702 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.4
SNX15-205ENST00000526702 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
SNX15-205ENST00000526702 CLIP1P30622 1438 aa17.51■□□□□ 0.39
SNX15-205ENST00000526702 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
SNX15-205ENST00000526702 MYT1LQ9UL68 1186 aa17.5■□□□□ 0.39
SNX15-205ENST00000526702 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
SNX15-205ENST00000526702 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
SNX15-205ENST00000526702 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
SNX15-205ENST00000526702 FBLN2P98095 1184 aa17.43■□□□□ 0.38
SNX15-205ENST00000526702 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
SNX15-205ENST00000526702 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
SNX15-205ENST00000526702 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
SNX15-205ENST00000526702 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
SNX15-205ENST00000526702 ANP32CO43423 234 aa17.32■□□□□ 0.36
SNX15-205ENST00000526702 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
SNX15-205ENST00000526702 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
SNX15-205ENST00000526702 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
SNX15-205ENST00000526702 SOGA1O94964 1423 aa17.26■□□□□ 0.35
SNX15-205ENST00000526702 WIZO95785 1651 aa17.26■□□□□ 0.35
SNX15-205ENST00000526702 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
SNX15-205ENST00000526702 ACIN1Q9UKV3 1341 aaKnown RBP17.25■□□□□ 0.35
SNX15-205ENST00000526702 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
SNX15-205ENST00000526702 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
SNX15-205ENST00000526702 TONSLQ96HA7 1378 aa17.18■□□□□ 0.34
SNX15-205ENST00000526702 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
SNX15-205ENST00000526702 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
SNX15-205ENST00000526702 ZNF326Q5BKZ1 582 aaKnown RBP17.16■□□□□ 0.34
SNX15-205ENST00000526702 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
SNX15-205ENST00000526702 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
SNX15-205ENST00000526702 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
SNX15-205ENST00000526702 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
SNX15-205ENST00000526702 CUX2O14529 1486 aa17.06■□□□□ 0.32
SNX15-205ENST00000526702 VPS8Q8N3P4 1428 aa17.06■□□□□ 0.32
SNX15-205ENST00000526702 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
SNX15-205ENST00000526702 CHIC2Q9UKJ5 165 aa17.04■□□□□ 0.32
SNX15-205ENST00000526702 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
SNX15-205ENST00000526702 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
SNX15-205ENST00000526702 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
SNX15-205ENST00000526702 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
SNX15-205ENST00000526702 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
SNX15-205ENST00000526702 DAXXQ9UER7 740 aaPredicted RBP16.95■□□□□ 0.3
SNX15-205ENST00000526702 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
SNX15-205ENST00000526702 BCANQ96GW7 911 aa16.93■□□□□ 0.3
SNX15-205ENST00000526702 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
SNX15-205ENST00000526702 MIER1Q8N108 512 aa16.92■□□□□ 0.3
SNX15-205ENST00000526702 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.3
SNX15-205ENST00000526702 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
SNX15-205ENST00000526702 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
SNX15-205ENST00000526702 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNX15-205ENST00000526702 EIF4G2P78344 907 aaKnown RBP eCLIP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms