RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.91
UBE3B-209ENST00000539584 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
UBE3B-209ENST00000539584 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
UBE3B-209ENST00000539584 SHROOM4Q9ULL8 1493 aa22.76■■□□□ 1.23
UBE3B-209ENST00000539584 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
UBE3B-209ENST00000539584 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
UBE3B-209ENST00000539584 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.14
UBE3B-209ENST00000539584 MYO15BQ96JP2 1530 aa21.97■■□□□ 1.11
UBE3B-209ENST00000539584 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
UBE3B-209ENST00000539584 HRCP23327 699 aa21.89■■□□□ 1.09
UBE3B-209ENST00000539584 ABCC9O60706 1549 aa21.59■■□□□ 1.05
UBE3B-209ENST00000539584 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
UBE3B-209ENST00000539584 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
UBE3B-209ENST00000539584 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
UBE3B-209ENST00000539584 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
UBE3B-209ENST00000539584 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
UBE3B-209ENST00000539584 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
UBE3B-209ENST00000539584 NACADO15069 1562 aa21.15■□□□□ 0.98
UBE3B-209ENST00000539584 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
UBE3B-209ENST00000539584 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
UBE3B-209ENST00000539584 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
UBE3B-209ENST00000539584 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
UBE3B-209ENST00000539584 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
UBE3B-209ENST00000539584 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.91
UBE3B-209ENST00000539584 WIZO95785 1651 aa20.71■□□□□ 0.91
UBE3B-209ENST00000539584 FAM9AQ8IZU1 332 aaPredicted RBP20.71■□□□□ 0.91
UBE3B-209ENST00000539584 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
UBE3B-209ENST00000539584 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
UBE3B-209ENST00000539584 WRNQ14191 1432 aaPredicted RBP eCLIP20.47■□□□□ 0.87
UBE3B-209ENST00000539584 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
UBE3B-209ENST00000539584 EEA1Q15075 1411 aa20.43■□□□□ 0.86
UBE3B-209ENST00000539584 PELP1Q8IZL8 1130 aaKnown RBP20.43■□□□□ 0.86
UBE3B-209ENST00000539584 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
UBE3B-209ENST00000539584 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
UBE3B-209ENST00000539584 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
UBE3B-209ENST00000539584 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
UBE3B-209ENST00000539584 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
UBE3B-209ENST00000539584 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
UBE3B-209ENST00000539584 CEP162Q5TB80 1403 aa20.27■□□□□ 0.84
UBE3B-209ENST00000539584 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
UBE3B-209ENST00000539584 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
UBE3B-209ENST00000539584 CSRNP3Q8WYN3 585 aa20.2■□□□□ 0.82
UBE3B-209ENST00000539584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
UBE3B-209ENST00000539584 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
UBE3B-209ENST00000539584 SOGA1O94964 1423 aa20.17■□□□□ 0.82
UBE3B-209ENST00000539584 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
UBE3B-209ENST00000539584 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
UBE3B-209ENST00000539584 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
UBE3B-209ENST00000539584 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
UBE3B-209ENST00000539584 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
UBE3B-209ENST00000539584 DIEXFQ68CQ4 756 aaKnown RBP20.03■□□□□ 0.8
UBE3B-209ENST00000539584 KIF21BO75037 1637 aa20.03■□□□□ 0.8
UBE3B-209ENST00000539584 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
UBE3B-209ENST00000539584 CENPBP07199 599 aaPredicted RBP20.01■□□□□ 0.79
UBE3B-209ENST00000539584 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
UBE3B-209ENST00000539584 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
UBE3B-209ENST00000539584 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
UBE3B-209ENST00000539584 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
UBE3B-209ENST00000539584 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
UBE3B-209ENST00000539584 CLIP1P30622 1438 aa19.88■□□□□ 0.77
UBE3B-209ENST00000539584 NEUROD1Q13562 356 aa19.87■□□□□ 0.77
UBE3B-209ENST00000539584 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
UBE3B-209ENST00000539584 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
UBE3B-209ENST00000539584 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
UBE3B-209ENST00000539584 APLP2Q06481 763 aa19.77■□□□□ 0.76
UBE3B-209ENST00000539584 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
UBE3B-209ENST00000539584 CLSPNQ9HAW4 1339 aa19.73■□□□□ 0.75
UBE3B-209ENST00000539584 GTF3C3Q9Y5Q9 886 aa19.72■□□□□ 0.75
UBE3B-209ENST00000539584 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
UBE3B-209ENST00000539584 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
UBE3B-209ENST00000539584 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
UBE3B-209ENST00000539584 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
UBE3B-209ENST00000539584 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
UBE3B-209ENST00000539584 HMGXB3Q12766 1538 aa19.57■□□□□ 0.72
UBE3B-209ENST00000539584 MYT1Q01538 1121 aa19.56■□□□□ 0.72
UBE3B-209ENST00000539584 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
UBE3B-209ENST00000539584 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
UBE3B-209ENST00000539584 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
UBE3B-209ENST00000539584 MIER1Q8N108 512 aa19.49■□□□□ 0.71
UBE3B-209ENST00000539584 RRBP1Q9P2E9 1410 aaKnown RBP19.48■□□□□ 0.71
UBE3B-209ENST00000539584 CUX2O14529 1486 aa19.45■□□□□ 0.7
UBE3B-209ENST00000539584 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
UBE3B-209ENST00000539584 CUX1P39880 1505 aa19.41■□□□□ 0.7
UBE3B-209ENST00000539584 CFTRP13569 1480 aa19.41■□□□□ 0.7
UBE3B-209ENST00000539584 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
UBE3B-209ENST00000539584 YTHDC1Q96MU7 727 aaKnown RBP19.35■□□□□ 0.69
UBE3B-209ENST00000539584 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.68
UBE3B-209ENST00000539584 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
UBE3B-209ENST00000539584 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
UBE3B-209ENST00000539584 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
UBE3B-209ENST00000539584 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
UBE3B-209ENST00000539584 IGF1RP08069 1367 aa19.2■□□□□ 0.66
UBE3B-209ENST00000539584 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
UBE3B-209ENST00000539584 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
UBE3B-209ENST00000539584 TIMELESSQ9UNS1 1208 aa19.13■□□□□ 0.65
UBE3B-209ENST00000539584 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
UBE3B-209ENST00000539584 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
UBE3B-209ENST00000539584 LRRC9Q6ZRR7 1453 aa19.11■□□□□ 0.65
UBE3B-209ENST00000539584 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
UBE3B-209ENST00000539584 SETD5Q9C0A6 1442 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms