Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MTHFRP42898 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC9.12□□□□□ -0.95
MTHFRP42898 AC005722.2-201ENST00000577087 3370 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AC239859.1-201ENST00000449715 2594 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 AC079777.1-201ENST00000623836 1953 ntBASIC9.12□□□□□ -0.95
MTHFRP42898 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 AC073539.1-201ENST00000599810 2094 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC9.11□□□□□ -0.95
MTHFRP42898 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 RCL1-201ENST00000381728 758 ntTSL 3 BASIC9.11□□□□□ -0.95
MTHFRP42898 GZMB-203ENST00000382542 666 ntTSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 AL136968.2-201ENST00000407959 354 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 TMSB10P1-201ENST00000415070 132 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AL591074.1-201ENST00000437012 797 ntTSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 ST13P2-201ENST00000438916 1109 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 MARK2P14-201ENST00000449657 628 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 RPSAP54-201ENST00000454001 886 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 RBMX2P1-201ENST00000454795 836 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC9.11□□□□□ -0.95
MTHFRP42898 SNX18P4-201ENST00000456554 838 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 ST13P18-201ENST00000456632 1027 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 RN7SL587P-201ENST00000459853 281 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 GAPDHP50-201ENST00000464421 993 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AC026254.1-201ENST00000479473 431 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AC018695.1-201ENST00000484096 664 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 OR7E28P-201ENST00000505191 975 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 MIR100HG-211ENST00000531071 970 ntTSL 3 BASIC9.11□□□□□ -0.95
MTHFRP42898 AC136944.5-201ENST00000573021 151 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 MIR4258-201ENST00000580920 91 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC9.11□□□□□ -0.95
MTHFRP42898 GMFG-210ENST00000601387 497 ntTSL 3 BASIC9.11□□□□□ -0.95
MTHFRP42898 AL512413.1-201ENST00000606489 382 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AC012511.1-201ENST00000608140 449 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AL669830.1-201ENST00000621457 656 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AC073488.5-201ENST00000631993 754 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 HCCAT5-202ENST00000642127 1029 ntBASIC9.11□□□□□ -0.95
MTHFRP42898 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 THADA-202ENST00000402360 2974 ntTSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.11□□□□□ -0.95
MTHFRP42898 CHRM2-202ENST00000401861 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MTHFRP42898 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9.11□□□□□ -0.95
MTHFRP42898 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC9.1□□□□□ -0.95
MTHFRP42898 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 AC114980.1-201ENST00000505668 3157 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC9.1□□□□□ -0.95
MTHFRP42898 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC9.1□□□□□ -0.95
MTHFRP42898 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 AC108215.1-201ENST00000624463 3226 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC9.1□□□□□ -0.95
MTHFRP42898 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC9.1□□□□□ -0.95
MTHFRP42898 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC9.1□□□□□ -0.95
MTHFRP42898 AL032822.1-201ENST00000405827 1063 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 U3.33-201ENST00000408117 204 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 RN7SKP39-201ENST00000410773 322 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC9.1□□□□□ -0.95
MTHFRP42898 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC9.1□□□□□ -0.95
MTHFRP42898 HMGN2P24-201ENST00000433516 273 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 AL359711.1-201ENST00000441999 123 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 AL590609.1-201ENST00000442164 328 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms