RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
DSC3-202ENST00000434452 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
DSC3-202ENST00000434452 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
DSC3-202ENST00000434452 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
DSC3-202ENST00000434452 APLP2Q06481 763 aa14.7□□□□□ -0.06
DSC3-202ENST00000434452 SUPT5HO00267 1087 aaKnown RBP14.61□□□□□ -0.07
DSC3-202ENST00000434452 ERICH6Q7L0X2 663 aa14.47□□□□□ -0.09
DSC3-202ENST00000434452 ATP1B4Q9UN42 357 aaPredicted RBP14.46□□□□□ -0.09
DSC3-202ENST00000434452 MYT1LQ9UL68 1186 aa14.41□□□□□ -0.1
DSC3-202ENST00000434452 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
DSC3-202ENST00000434452 RANGAP1P46060 587 aaPredicted RBP14.38□□□□□ -0.11
DSC3-202ENST00000434452 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
DSC3-202ENST00000434452 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
DSC3-202ENST00000434452 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
DSC3-202ENST00000434452 SLC4A1APQ9BWU0 796 aaKnown RBP14.01□□□□□ -0.17
DSC3-202ENST00000434452 MYT1Q01538 1121 aa13.99□□□□□ -0.17
DSC3-202ENST00000434452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
DSC3-202ENST00000434452 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
DSC3-202ENST00000434452 POLR3GLQ9BT43 218 aa13.94□□□□□ -0.18
DSC3-202ENST00000434452 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
DSC3-202ENST00000434452 NEFLP07196 543 aa13.86□□□□□ -0.19
DSC3-202ENST00000434452 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
DSC3-202ENST00000434452 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
DSC3-202ENST00000434452 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
DSC3-202ENST00000434452 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
DSC3-202ENST00000434452 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
DSC3-202ENST00000434452 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
DSC3-202ENST00000434452 BCANQ96GW7 911 aa13.6□□□□□ -0.23
DSC3-202ENST00000434452 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
DSC3-202ENST00000434452 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
DSC3-202ENST00000434452 ITGAEP38570 1179 aa13.51□□□□□ -0.25
DSC3-202ENST00000434452 PLPPR3Q6T4P5 718 aa13.5□□□□□ -0.25
DSC3-202ENST00000434452 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
DSC3-202ENST00000434452 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
DSC3-202ENST00000434452 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
DSC3-202ENST00000434452 A0A0G2JS52 829 aa13.36□□□□□ -0.27
DSC3-202ENST00000434452 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
DSC3-202ENST00000434452 PPARGC1BQ86YN6 1023 aaKnown RBP13.27□□□□□ -0.29
DSC3-202ENST00000434452 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
DSC3-202ENST00000434452 NEFMP07197 916 aa13.21□□□□□ -0.29
DSC3-202ENST00000434452 FBLN2P98095 1184 aa13.19□□□□□ -0.3
DSC3-202ENST00000434452 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
DSC3-202ENST00000434452 ZEB1P37275 1124 aaPredicted RBP13.13□□□□□ -0.31
DSC3-202ENST00000434452 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
DSC3-202ENST00000434452 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
DSC3-202ENST00000434452 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
DSC3-202ENST00000434452 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
DSC3-202ENST00000434452 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
DSC3-202ENST00000434452 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
DSC3-202ENST00000434452 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
DSC3-202ENST00000434452 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
DSC3-202ENST00000434452 TULP1O00294 542 aaPredicted RBP13.05□□□□□ -0.32
DSC3-202ENST00000434452 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
DSC3-202ENST00000434452 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.34
DSC3-202ENST00000434452 ZBTB7CA1YPR0 619 aa12.94□□□□□ -0.34
DSC3-202ENST00000434452 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
DSC3-202ENST00000434452 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
DSC3-202ENST00000434452 NISCHQ9Y2I1 1504 aa12.89□□□□□ -0.35
DSC3-202ENST00000434452 ARXQ96QS3 562 aa12.86□□□□□ -0.35
DSC3-202ENST00000434452 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
DSC3-202ENST00000434452 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
DSC3-202ENST00000434452 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
DSC3-202ENST00000434452 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
DSC3-202ENST00000434452 NPHP1O15259 732 aa12.83□□□□□ -0.36
DSC3-202ENST00000434452 NEUROD1Q13562 356 aa12.82□□□□□ -0.36
DSC3-202ENST00000434452 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
DSC3-202ENST00000434452 ANP32BQ92688 251 aaKnown RBP12.75□□□□□ -0.37
DSC3-202ENST00000434452 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
DSC3-202ENST00000434452 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
DSC3-202ENST00000434452 CLSTN1O94985 981 aa12.67□□□□□ -0.38
DSC3-202ENST00000434452 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
DSC3-202ENST00000434452 ARID4BQ4LE39 1312 aaPredicted RBP12.61□□□□□ -0.39
DSC3-202ENST00000434452 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
DSC3-202ENST00000434452 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
DSC3-202ENST00000434452 ANP32CO43423 234 aa12.57□□□□□ -0.4
DSC3-202ENST00000434452 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
DSC3-202ENST00000434452 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
DSC3-202ENST00000434452 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
DSC3-202ENST00000434452 UPF2Q9HAU5 1272 aaKnown RBP12.53□□□□□ -0.4
DSC3-202ENST00000434452 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
DSC3-202ENST00000434452 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
DSC3-202ENST00000434452 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
DSC3-202ENST00000434452 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
DSC3-202ENST00000434452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
DSC3-202ENST00000434452 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
DSC3-202ENST00000434452 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
DSC3-202ENST00000434452 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
DSC3-202ENST00000434452 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
DSC3-202ENST00000434452 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
DSC3-202ENST00000434452 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
DSC3-202ENST00000434452 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
DSC3-202ENST00000434452 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
DSC3-202ENST00000434452 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
DSC3-202ENST00000434452 HRCP23327 699 aa12.36□□□□□ -0.43
DSC3-202ENST00000434452 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
DSC3-202ENST00000434452 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.35□□□□□ -0.43
DSC3-202ENST00000434452 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
DSC3-202ENST00000434452 CCDC9Q9Y3X0 531 aaKnown RBP12.34□□□□□ -0.43
DSC3-202ENST00000434452 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
DSC3-202ENST00000434452 FKBP8Q14318 412 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms