RNA–Protein interactions for RNA: ENST00000566488.1

ATMIN-206, Transcript of ATM interactor, humanhuman

TSL 1 (best) BASIC

Gene ATMIN, Length 5,343 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATMIN-206ENST00000566488 NISCHQ9Y2I1 1504 aa17.35■□□□□ 0.37
ATMIN-206ENST00000566488 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
ATMIN-206ENST00000566488 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
ATMIN-206ENST00000566488 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
ATMIN-206ENST00000566488 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
ATMIN-206ENST00000566488 FAM9AQ8IZU1 332 aaPredicted RBP14.5□□□□□ -0.09
ATMIN-206ENST00000566488 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
ATMIN-206ENST00000566488 ABCC9O60706 1549 aa14.35□□□□□ -0.11
ATMIN-206ENST00000566488 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
ATMIN-206ENST00000566488 APLP2Q06481 763 aa14.3□□□□□ -0.12
ATMIN-206ENST00000566488 NACADO15069 1562 aa14.28□□□□□ -0.12
ATMIN-206ENST00000566488 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
ATMIN-206ENST00000566488 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
ATMIN-206ENST00000566488 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
ATMIN-206ENST00000566488 ZEB1P37275 1124 aaPredicted RBP13.99□□□□□ -0.17
ATMIN-206ENST00000566488 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
ATMIN-206ENST00000566488 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
ATMIN-206ENST00000566488 CHIC1Q5VXU3 224 aa13.78□□□□□ -0.2
ATMIN-206ENST00000566488 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
ATMIN-206ENST00000566488 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
ATMIN-206ENST00000566488 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
ATMIN-206ENST00000566488 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
ATMIN-206ENST00000566488 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
ATMIN-206ENST00000566488 EEA1Q15075 1411 aa13.58□□□□□ -0.24
ATMIN-206ENST00000566488 RSF1Q96T23 1441 aaPredicted RBP13.54□□□□□ -0.24
ATMIN-206ENST00000566488 SMARCA2P51531 1590 aa13.52□□□□□ -0.24
ATMIN-206ENST00000566488 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
ATMIN-206ENST00000566488 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
ATMIN-206ENST00000566488 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
ATMIN-206ENST00000566488 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
ATMIN-206ENST00000566488 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
ATMIN-206ENST00000566488 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
ATMIN-206ENST00000566488 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
ATMIN-206ENST00000566488 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
ATMIN-206ENST00000566488 CENPBP07199 599 aaPredicted RBP13.31□□□□□ -0.28
ATMIN-206ENST00000566488 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
ATMIN-206ENST00000566488 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
ATMIN-206ENST00000566488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
ATMIN-206ENST00000566488 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
ATMIN-206ENST00000566488 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
ATMIN-206ENST00000566488 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
ATMIN-206ENST00000566488 TTBK1Q5TCY1 1321 aaPredicted RBP13.21□□□□□ -0.29
ATMIN-206ENST00000566488 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
ATMIN-206ENST00000566488 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
ATMIN-206ENST00000566488 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
ATMIN-206ENST00000566488 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
ATMIN-206ENST00000566488 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
ATMIN-206ENST00000566488 HRCP23327 699 aa13.14□□□□□ -0.31
ATMIN-206ENST00000566488 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
ATMIN-206ENST00000566488 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
ATMIN-206ENST00000566488 TNIKQ9UKE5 1360 aa13.1□□□□□ -0.31
ATMIN-206ENST00000566488 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
ATMIN-206ENST00000566488 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.31
ATMIN-206ENST00000566488 CLIP1P30622 1438 aa13.03□□□□□ -0.32
ATMIN-206ENST00000566488 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
ATMIN-206ENST00000566488 WIZO95785 1651 aa13.02□□□□□ -0.33
ATMIN-206ENST00000566488 FAM50AQ14320 339 aaKnown RBP13.01□□□□□ -0.33
ATMIN-206ENST00000566488 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
ATMIN-206ENST00000566488 NCAPD3P42695 1498 aa13□□□□□ -0.33
ATMIN-206ENST00000566488 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
ATMIN-206ENST00000566488 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
ATMIN-206ENST00000566488 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
ATMIN-206ENST00000566488 NEFLP07196 543 aa12.97□□□□□ -0.33
ATMIN-206ENST00000566488 FBLN2P98095 1184 aa12.96□□□□□ -0.33
ATMIN-206ENST00000566488 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
ATMIN-206ENST00000566488 ITGAEP38570 1179 aa12.93□□□□□ -0.34
ATMIN-206ENST00000566488 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
ATMIN-206ENST00000566488 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
ATMIN-206ENST00000566488 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
ATMIN-206ENST00000566488 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
ATMIN-206ENST00000566488 TRIM52Q96A61 297 aa12.88□□□□□ -0.35
ATMIN-206ENST00000566488 CUX2O14529 1486 aa12.87□□□□□ -0.35
ATMIN-206ENST00000566488 MTUS2Q5JR59 1369 aa12.86□□□□□ -0.35
ATMIN-206ENST00000566488 CARMIL1Q5VZK9 1371 aa12.85□□□□□ -0.35
ATMIN-206ENST00000566488 SOGA1O94964 1423 aa12.81□□□□□ -0.36
ATMIN-206ENST00000566488 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
ATMIN-206ENST00000566488 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
ATMIN-206ENST00000566488 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
ATMIN-206ENST00000566488 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
ATMIN-206ENST00000566488 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
ATMIN-206ENST00000566488 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
ATMIN-206ENST00000566488 VPS8Q8N3P4 1428 aa12.75□□□□□ -0.37
ATMIN-206ENST00000566488 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
ATMIN-206ENST00000566488 PLEKHD1A6NEE1 506 aa12.74□□□□□ -0.37
ATMIN-206ENST00000566488 TSPY4P0CV99 314 aa12.72□□□□□ -0.37
ATMIN-206ENST00000566488 TSPY10P0CW01 314 aa12.72□□□□□ -0.37
ATMIN-206ENST00000566488 CFTRP13569 1480 aa12.71□□□□□ -0.37
ATMIN-206ENST00000566488 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
ATMIN-206ENST00000566488 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
ATMIN-206ENST00000566488 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
ATMIN-206ENST00000566488 ERICH3Q5RHP9 1530 aa12.68□□□□□ -0.38
ATMIN-206ENST00000566488 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
ATMIN-206ENST00000566488 KIF21BO75037 1637 aa12.67□□□□□ -0.38
ATMIN-206ENST00000566488 ANP32CO43423 234 aa12.66□□□□□ -0.38
ATMIN-206ENST00000566488 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
ATMIN-206ENST00000566488 TIMELESSQ9UNS1 1208 aa12.65□□□□□ -0.38
ATMIN-206ENST00000566488 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
ATMIN-206ENST00000566488 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
ATMIN-206ENST00000566488 ESF1Q9H501 851 aaKnown RBP12.64□□□□□ -0.39
ATMIN-206ENST00000566488 ZNF777Q9ULD5 760 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms