Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 AC026310.3-201ENST00000625186 2373 ntBASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA4Q9Y5G9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 STK33P1-201ENST00000423835 1218 ntBASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA4Q9Y5G9 AL020996.1-203ENST00000536896 2307 ntBASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA4Q9Y5G9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 FEM1AP4-201ENST00000443167 1987 ntBASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 AC092118.2-201ENST00000613495 667 ntBASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 OR10C1-204ENST00000622521 1039 ntBASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA4Q9Y5G9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 RPS2P52-201ENST00000469610 820 ntBASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 AC007322.4-201ENST00000509611 723 ntBASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 RARRES2P4-201ENST00000514074 484 ntBASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms