Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB1Q9Y5G3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 SERBP1P1-201ENST00000396021 1160 ntBASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 AC106739.1-201ENST00000617035 715 ntBASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB1Q9Y5G3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 SLC47A1P1-202ENST00000449666 945 ntBASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB1Q9Y5G3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGB1Q9Y5G3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB1Q9Y5G3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PCDHGB1Q9Y5G3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGB1Q9Y5G3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGB1Q9Y5G3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 AC026271.2-201ENST00000428091 497 ntBASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB1Q9Y5G3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGB1Q9Y5G3 SMUG1P1-201ENST00000590640 811 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms