Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 MIR2861-201ENST00000636310 90 ntBASIC23.81■■□□□ 1.4
KIF3AQ9Y496 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KIF3AQ9Y496 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 AC007322.3-201ENST00000426526 701 ntBASIC23.8■■□□□ 1.4
KIF3AQ9Y496 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 AC019069.1-201ENST00000610008 1333 ntBASIC23.8■■□□□ 1.4
KIF3AQ9Y496 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
KIF3AQ9Y496 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 AC091799.1-201ENST00000422823 811 ntBASIC23.79■■□□□ 1.4
KIF3AQ9Y496 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KIF3AQ9Y496 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 CDV3P1-201ENST00000471403 739 ntBASIC23.78■■□□□ 1.4
KIF3AQ9Y496 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 AL162377.1-201ENST00000618844 1793 ntBASIC23.78■■□□□ 1.4
KIF3AQ9Y496 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KIF3AQ9Y496 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 FAM21FP-204ENST00000608637 956 ntBASIC23.77■■□□□ 1.4
KIF3AQ9Y496 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.77■■□□□ 1.4
KIF3AQ9Y496 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
KIF3AQ9Y496 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.76■■□□□ 1.39
KIF3AQ9Y496 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
KIF3AQ9Y496 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
KIF3AQ9Y496 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
KIF3AQ9Y496 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.76■■□□□ 1.39
KIF3AQ9Y496 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KIF3AQ9Y496 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms