Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 AC007322.1-201ENST00000426983 750 ntBASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 CNN2P6-201ENST00000439038 900 ntBASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 RAP2CP1-201ENST00000605103 478 ntBASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHTF1Q9UMS5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 AC006128.1-201ENST00000624704 1661 ntBASIC20.93■□□□□ 0.94
PHTF1Q9UMS5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.92■□□□□ 0.94
PHTF1Q9UMS5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 AC090192.1-201ENST00000517740 490 ntBASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.91■□□□□ 0.94
PHTF1Q9UMS5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 AC091799.1-201ENST00000422823 811 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms