Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 AC091799.1-201ENST00000422823 811 ntBASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 AC012313.10-201ENST00000623509 926 ntBASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 AL353803.4-201ENST00000565882 1934 ntBASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3Q9BZ76 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3Q9BZ76 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 IER3-202ENST00000376377 1350 ntBASIC19.44■□□□□ 0.7
CNTNAP3Q9BZ76 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 FAM8A6P-201ENST00000407496 1135 ntBASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 AC079089.2-201ENST00000531211 1277 ntBASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3Q9BZ76 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CNTNAP3Q9BZ76 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CNTNAP3Q9BZ76 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms