Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.41■□□□□ 0.7
THUMPD3Q9BV44 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.41■□□□□ 0.7
THUMPD3Q9BV44 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD3Q9BV44 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD3Q9BV44 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD3Q9BV44 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
THUMPD3Q9BV44 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
THUMPD3Q9BV44 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 TPRG1LP1-201ENST00000598702 760 ntBASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 AC008175.2-201ENST00000612840 297 ntBASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD3Q9BV44 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD3Q9BV44 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 AC027612.3-201ENST00000413684 1047 ntBASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD3Q9BV44 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 POU5F1P4-201ENST00000413175 1085 ntBASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.36■□□□□ 0.69
THUMPD3Q9BV44 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms