Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 AL162377.1-201ENST00000618844 1793 ntBASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMSS1Q9BQ75 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 AP001330.3-201ENST00000520123 633 ntBASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 AC008175.2-201ENST00000612840 297 ntBASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.33■□□□□ 0.36
CMSS1Q9BQ75 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 AC112907.3-201ENST00000577781 2400 ntBASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 EDA-201ENST00000338901 1233 ntBASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMSS1Q9BQ75 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 RASA4CP-201ENST00000424092 1398 ntBASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 AC008406.3-201ENST00000620001 1374 ntBASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 AC106739.1-201ENST00000617035 715 ntBASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMSS1Q9BQ75 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 AC092720.2-201ENST00000602388 1665 ntBASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 POU5F1P4-201ENST00000413175 1085 ntBASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms