Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC092028.1-203ENST00000608262 953 ntBASIC17.92■□□□□ 0.46
AP3S1Q92572 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.92■□□□□ 0.46
AP3S1Q92572 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.92■□□□□ 0.46
AP3S1Q92572 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
AP3S1Q92572 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.92■□□□□ 0.46
AP3S1Q92572 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3S1Q92572 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3S1Q92572 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3S1Q92572 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 AL031848.2-201ENST00000607670 837 ntBASIC17.91■□□□□ 0.46
AP3S1Q92572 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3S1Q92572 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S1Q92572 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
AP3S1Q92572 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3S1Q92572 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.9■□□□□ 0.46
AP3S1Q92572 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
AP3S1Q92572 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
AP3S1Q92572 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP3S1Q92572 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S1Q92572 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.9■□□□□ 0.46
AP3S1Q92572 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.9■□□□□ 0.46
AP3S1Q92572 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S1Q92572 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S1Q92572 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
AP3S1Q92572 NTF6A-201ENST00000591175 560 ntBASIC17.9■□□□□ 0.46
AP3S1Q92572 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S1Q92572 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S1Q92572 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
AP3S1Q92572 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S1Q92572 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
AP3S1Q92572 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
AP3S1Q92572 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
AP3S1Q92572 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
AP3S1Q92572 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3S1Q92572 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 AC020763.4-201ENST00000623414 4170 ntBASIC17.89■□□□□ 0.45
AP3S1Q92572 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
AP3S1Q92572 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.89■□□□□ 0.45
AP3S1Q92572 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3S1Q92572 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3S1Q92572 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S1Q92572 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
AP3S1Q92572 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.88■□□□□ 0.45
AP3S1Q92572 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms