Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MBD3L1Q8WWY6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 TREX1-205ENST00000625293 1783 ntBASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 YBX1P4-201ENST00000392794 808 ntBASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 NTF6A-201ENST00000591175 560 ntBASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 AC055733.4-201ENST00000638462 1354 ntBASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L1Q8WWY6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.96■□□□□ 0.14
MBD3L1Q8WWY6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.96■□□□□ 0.14
MBD3L1Q8WWY6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
MBD3L1Q8WWY6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MBD3L1Q8WWY6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 AC010525.1-201ENST00000585559 441 ntBASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 AL031848.2-201ENST00000607670 837 ntBASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
MBD3L1Q8WWY6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 MIR3181-201ENST00000578512 73 ntBASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 AL138781.2-201ENST00000617896 1843 ntBASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L1Q8WWY6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L1Q8WWY6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L1Q8WWY6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.93■□□□□ 0.14
MBD3L1Q8WWY6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L1Q8WWY6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
MBD3L1Q8WWY6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L1Q8WWY6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L1Q8WWY6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms