Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 AC136469.2-201ENST00000623944 1028 ntBASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 TNXA-203ENST00000507684 2038 ntBASIC20.09■□□□□ 0.81
RFWD2Q8NHY2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
RFWD2Q8NHY2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD2Q8NHY2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 UNC93B3-201ENST00000308076 687 ntBASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 AL138724.1-201ENST00000606771 1088 ntBASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RFWD2Q8NHY2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD2Q8NHY2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD2Q8NHY2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 AC096631.2-201ENST00000436136 790 ntBASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD2Q8NHY2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms