Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 KRT18P61-201ENST00000585825 1298 ntBASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 MYCNOS-205ENST00000641950 531 ntBASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 UBE2DNL-204ENST00000602536 740 ntBASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK2A3Q8NEV1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 AP005212.1-201ENST00000581547 1997 ntBASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK2A3Q8NEV1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 AC091799.1-201ENST00000422823 811 ntBASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 AC007322.3-201ENST00000426526 701 ntBASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 CDV3P1-201ENST00000471403 739 ntBASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 RARRES2P6-201ENST00000567333 442 ntBASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 AC027702.1-201ENST00000563810 1770 ntBASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 AC073314.1-201ENST00000568729 2216 ntBASIC17.66■□□□□ 0.42
CSNK2A3Q8NEV1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms